configure barcode combinations and linker removal for Singleron GEXSC… #236

	name: Test SCI-Seq
Check failure on line 1 in .github/workflows/docker-test-sciseq.yml View workflow run for this annotation GitHub Actions / .github/workflows/docker-test-sciseq.yml Invalid workflow file `workflow_dispach` is not a valid event name
	on: workflow_dispach
	jobs:
	test:
	runs-on: ubuntu-20.04
	steps:
	- uses: actions/checkout@v2
	- name: Build the stack
	run: docker-compose up -d
	- name: Status
	run: echo "build complete"

	test-sci-seq:
	runs-on: ubuntu-20.04
	steps:
	- uses: actions/checkout@v2
	- uses: docker/setup-buildx-action@v1
	- uses: docker/login-action@v1
	with:
	username: ${{ secrets.DOCKER_HUB_USERNAME }}
	password: ${{ secrets.DOCKER_HUB_ACCESS_TOKEN }}
	registry: ${{ env.REGISTRY }}

	- name: Build and push
	uses: docker/build-push-action@v2
	with:
	context: ./
	file: ./Dockerfile
	tags: ${{ secrets.DOCKER_HUB_USERNAME }}/universc:test
	push: false
	- name: clear environment
	run: rm -rf *
	- name: Test SCI-Seq
	run: docker run ${{ secrets.DOCKER_HUB_USERNAME }}/universc:test timeout 30m bash /universc/test/run_tests_sciseq_gh_actions.sh \|\| code=$?; if [[ $code -ne 124 && $code -ne 0 ]]; then exit $code; fi

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