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update to spades version 4.0 #7

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aclum opened this issue Oct 3, 2024 · 1 comment

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aclum commented Oct 3, 2024

JGI is on spades version 4.0, Brian has also reorganized the wdls. We have to wait until he ports the metatranscritpome one to version 1.0 before we can updated b/c right now we are importing an old wdl.
We need to use one of these wdls
https://code.jgi.doe.gov/BFoster/jgi_meta/-/tree/main/jgi_meta_wdl_sets/metatranscriptome_assembly_and_alignment_4_0*

aclum self-assigned this

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aclum commented Oct 3, 2024

backlog until Brian coverts the wdl to 1.0.

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