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docs: minor updates to docs of get/setPosition #117

docs: minor updates to docs of get/setPosition

docs: minor updates to docs of get/setPosition #117

Workflow file for this run

name: Build and publish
on:
pull_request:
push:
branches:
- main
tags:
- 'v*'
jobs:
upload:
name: Upload to PyPI
if: github.repository == 'micro-manager/pymmcore'
runs-on: ubuntu-latest
needs: [sdist, wheels-manylinux, wheels-winmac]
steps:
- name: Download wheels and sdist
uses: actions/download-artifact@v3
- name: Collect wheels and sdist
run: |
mkdir dist
mv pymmcore-sdist/* dist/
mv pymmcore-wheels-manylinux/* dist/
mv pymmcore-wheels-win-mac/* dist/
ls dist
- name: Upload release to PyPI
uses: pypa/gh-action-pypi-publish@release/v1
if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v')
with:
user: __token__
password: ${{ secrets.PYPI_API_TOKEN }}
sdist:
name: sdist
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- name: Checkout submodules
run: |
git submodule sync --recursive
git submodule update --init --force --recursive --depth=1
- name: Install tools and dependencies
run: |
sudo apt-get install -y python3-dev python3-pip python3-venv
python3 -m venv venv
source venv/bin/activate
pip install --upgrade pip build
- name: Create source distribution
run: |
source venv/bin/activate
python -m build --sdist --outdir dist/ .
- uses: actions/upload-artifact@v3
with:
name: pymmcore-sdist
path: dist
wheels-manylinux:
strategy:
fail-fast: true
matrix:
manylinux-version: ['2014']
arch: [i686, x86_64]
include:
- arch: i686
numpy-versions: cp38-cp38 1.17.3 cp39-cp39 1.19.3
- arch: x86_64
numpy-versions: cp38-cp38 1.17.3 cp39-cp39 1.19.3 cp310-cp310 1.21.3 cp311-cp311 1.23.2
name: manylinux${{ matrix.manylinux-version }}_${{ matrix.arch }}
runs-on: ubuntu-latest
env:
AUDITWHEEL_PLAT: manylinux${{ matrix.manylinux-version }}_${{ matrix.arch }}
DOCKER_IMAGE: quay.io/pypa/manylinux${{ matrix.manylinux-version }}_${{ matrix.arch }}
NUMPY_VERSIONS: ${{ matrix.numpy-versions }}
steps:
- uses: actions/checkout@v3
- name: Checkout submodules
run: |
git submodule sync --recursive
git submodule update --init --force --recursive --depth=1
- name: Pull image
run: |
docker pull $DOCKER_IMAGE
- name: Build
run: |
docker run -e NUMPY_VERSIONS -e AUDITWHEEL_PLAT -v $(pwd):/io $DOCKER_IMAGE /io/manylinux/build.sh
- uses: actions/upload-artifact@v3
with:
name: pymmcore-wheels-manylinux
path: wheelhouse
wheels-winmac:
strategy:
fail-fast: true
matrix:
os: [Windows, macOS]
python-version: ['3.8', '3.9', '3.10', '3.11']
python-arch: [x64, x86]
macos-deployment-target: ['10.9']
msvc-version: ['14.1'] # VS2017
include:
- os: Windows
runner: windows-latest
- os: macOS
runner: macOS-latest
- python-version: '3.8'
mac-python-version: 3.8.10
mac-python-installer-macos-version: macosx10.9
numpy-version: 1.17.3
- python-version: '3.9'
mac-python-version: 3.9.7
mac-python-installer-macos-version: macosx10.9
numpy-version: 1.19.3
- python-version: '3.10'
mac-python-version: 3.10.0
mac-python-installer-macos-version: macos11
numpy-version: 1.21.3
- python-version: '3.11'
mac-python-version: 3.11.0
mac-python-installer-macos-version: macos11
numpy-version: 1.23.2
- python-arch: x64
msvc-arch: amd64
- python-arch: x86
msvc-arch: x86
exclude:
- os: macOS
python-arch: x86
- os: Windows # NumPy has 64-bit only for Windows wheels >= cp310
python-version: '3.10'
python-arch: x86
name: ${{ matrix.os }} Python ${{ matrix.python-version }} ${{ matrix.python-arch }}
runs-on: ${{ matrix.runner }}
env:
MACOSX_DEPLOYMENT_TARGET: ${{ matrix.macos-deployment-target }}
steps:
- uses: actions/checkout@v3
- name: Checkout submodules
run: |
git submodule sync --recursive
git submodule update --init --force --recursive --depth=1
- name: Find Visual Studio (Windows)
if: matrix.os == 'Windows'
shell: pwsh
run: |
$VsDir = (& "${Env:ProgramFiles(x86)}/Microsoft Visual Studio/Installer/vswhere" -latest -property installationPath)
echo "VCVARSALL_DIR=$VsDir/VC/Auxiliary/Build" >>$Env:GITHUB_ENV
- name: Install Python (generic)
uses: actions/setup-python@v4
if: matrix.os != 'macOS'
with:
python-version: ${{ matrix.python-version }}
architecture: ${{ matrix.python-arch }}
- name: Install Python (macOS)
if: matrix.os == 'macOS'
run: |
curl -L -o python.pkg https://www.python.org/ftp/python/${{ matrix.mac-python-version }}/python-${{ matrix.mac-python-version }}-${{ matrix.mac-python-installer-macos-version }}.pkg
sudo installer -pkg python.pkg -target /
/Library/Frameworks/Python.framework/Versions/${{ matrix.python-version }}/bin/python3 -m venv venv
- name: Install tools (Windows)
if: matrix.os == 'Windows'
run: |
choco install -y swig
- name: Install tools (macOS)
if: matrix.os == 'macOS'
run: |
brew install swig
- name: Install dependencies (Windows)
if: matrix.os == 'Windows'
run: |
python -m pip install --upgrade pip
python -m pip install --upgrade setuptools wheel
python -m pip install numpy==${{ matrix.numpy-version }}
- name: Install dependencies (Unix)
if: matrix.os != 'Windows'
run: |
source venv/bin/activate
python -m pip install --upgrade pip
python -m pip install --upgrade setuptools wheel
python -m pip install numpy==${{ matrix.numpy-version }}
- name: Package and extract sources (Windows)
if: matrix.os == 'Windows'
run: |
python setup.py sdist --format=zip
mkdir tmp
Expand-Archive -Path dist/pymmcore-*.zip -DestinationPath tmp
mv tmp/pymmcore-* tmp/pymmcore
- name: Package and extract sources (Unix)
if: matrix.os == 'macOS'
run: |
source venv/bin/activate
python setup.py sdist
mkdir tmp
tar xvzf dist/pymmcore-*.tar.gz -C tmp
mv tmp/pymmcore-* tmp/pymmcore
- name: Build wheel (Windows)
if: matrix.os == 'Windows'
shell: cmd
env:
MSSdk: 1
DISTUTILS_USE_SDK: 1
PY_VCRUNTIME_REDIST: 1
run: |
pushd "%VCVARSALL_DIR%"
call vcvarsall.bat ${{ matrix.msvc-arch }} -vcvars_ver=${{ matrix.msvc-version }}
popd
cd tmp\pymmcore
python setup.py build_ext
python setup.py build
python setup.py bdist_wheel
- name: Build wheel (macOS)
if: matrix.os == 'macOS'
env:
CC: clang
CXX: clang++
CFLAGS: -fvisibility=hidden -Wno-unused-variable
run: |
source venv/bin/activate
cd tmp/pymmcore
python setup.py build_ext -j2
python setup.py build
python setup.py bdist_wheel
- name: Log undefined symbols (macOS)
if: matrix.os == 'macOS'
run: |
cd tmp/pymmcore
PYMOD=$(echo build/lib.*/pymmcore/_pymmcore_swig.*.so)
echo "$PYMOD:"
echo 'Weak symbols:'
nm -mu $PYMOD |c++filt |grep ' weak ' # This is never empty
echo '-- end of weak symbols --'
echo 'Undefined symbols not containing Py:'
nm -mu $PYMOD |c++filt |grep 'dynamically looked up' |grep -v _Py && exit 1
echo '-- end of non-Py dynamically looked up symbols --'
- name: Smoke test (Windows)
if: matrix.os == 'Windows'
run: |
cd .. # Avoid picking up pymmcore.py from cwd
python -m pip install (Get-Item pymmcore/tmp/pymmcore/dist/pymmcore-*.whl).FullName
python pymmcore/smoketest/smoke.py
- name: Smoke test (Unix)
if: matrix.os != 'Windows'
run: |
source venv/bin/activate
cd .. # Avoid picking up pymmcore.py from cwd
python -m pip install pymmcore/tmp/pymmcore/dist/pymmcore-*.whl
python pymmcore/smoketest/smoke.py
- uses: actions/upload-artifact@v3
with:
name: pymmcore-wheels-win-mac
path: tmp/pymmcore/dist