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upload in preparation for submission to CRAN
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merliseclyde committed Nov 27, 2024
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19 changes: 13 additions & 6 deletions cran-comments.md
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Bugs:

- fixed issue #89: ERROR noted under Additional Issues: C23 (Checks of compiling
- Corrected Additional Issues: C23 (Checks of compiling
C code in C23 mode) on CRAN check page for compiling C code with
clang19 reported 11/16/24. Removed legacy code that was causing the error.
clang19 reported 11/16/24. Removed legacy code that was causing the error and if left
would trigger archival of package on CRAN. Github Issue #89

- Fixed Issue #87: Prior inclusions probabilities appear incorrect for a Bernoulli(.2) prior when always including one other predictor bug

## Test environments

- r-devel with valgrind via rhub github actions
- local OS X install, R 4.4.1 (x86, arm64)
- local OS X install, R 4.4.2 (x86, arm64)
- ubuntu (github actions CI), R-release R-devel R-oldrelease
- windows (github actions CI), R-release;
- win-builder (r-release, r-devel)

## R CMD check results for this submission
Expand All @@ -30,18 +32,23 @@ Compiled code should not call non-API entry points in R.

This is under development and I ask that CRAN allow this update
despite the NOTE to allow the package to be retained on CRAN.
The non-API calls identified by `Strict` have been fixed.
I have made some progress in removing the note but it is not yet complete.

The C23 error under Additional Issues has been fixed with removal of legacy code.

## Reverse Dependencies

- ginormal
- EMJMCMC
- PEPBVS

### revdepcheck results
## revdepcheck results

We checked 2 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
We checked 3 reverse dependencies, comparing R CMD check results across CRAN
and dev versions of this package.

* We saw 0 new problems
* We failed to check 0 packages



32 changes: 16 additions & 16 deletions revdep/README.md
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# Platform

|field |value |
|:--------|:----------------------------------------|
|version |R version 4.4.1 (2024-06-14) |
|os |macOS Sonoma 14.6.1 |
|system |aarch64, darwin20 |
|ui |RStudio |
|language |(EN) |
|collate |en_US.UTF-8 |
|ctype |en_US.UTF-8 |
|tz |America/New_York |
|date |2024-09-14 |
|rstudio |2024.04.2+764 Chocolate Cosmos (desktop) |
|pandoc |3.2.1 @ /usr/local/bin/ (via rmarkdown) |
|field |value |
|:--------|:------------------------------------------|
|version |R version 4.4.2 (2024-10-31) |
|os |macOS Sonoma 14.7.1 |
|system |aarch64, darwin20 |
|ui |RStudio |
|language |(EN) |
|collate |en_US.UTF-8 |
|ctype |en_US.UTF-8 |
|tz |America/New_York |
|date |2024-11-26 |
|rstudio |2024.09.1+394 Cranberry Hibiscus (desktop) |
|pandoc |3.2.1 @ /usr/local/bin/pandoc |

# Dependencies

|package |old |new |Δ |
|:-------|:-----|:----------|:--|
|BAS |1.7.1 |1.7.1.9000 |* |
|package |old |new |Δ |
|:-------|:-----|:-----|:--|
|BAS |1.7.3 |1.7.4 |* |

# Revdeps

2 changes: 1 addition & 1 deletion revdep/cran.md
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## revdepcheck results

We checked 2 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.
We checked 3 reverse dependencies, comparing R CMD check results across CRAN and dev versions of this package.

* We saw 0 new problems
* We failed to check 0 packages
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