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PHATE

PHATE #687

Workflow file for this run

name: Lint and Test
on: pull_request
jobs:
lint:
name: Lint
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v3
- uses: psf/black@stable
with:
src: "viscy"
options: "--check --verbose"
- uses: chartboost/ruff-action@v1
with:
src: "viscy"
test:
name: Test
needs: [lint]
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.10", "3.11", "3.12"]
steps:
- uses: actions/checkout@v3
- uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
# Install cpu wheels only to speed up the build
pip install torch torchvision --index-url https://download.pytorch.org/whl/cpu
pip install ".[dev]"
- name: Test with pytest
run: pytest -v