Adding a caching dataloader for 3D dataset #594
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
name: Lint and Test | |
on: pull_request | |
jobs: | |
lint: | |
name: Lint | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: psf/black@stable | |
with: | |
src: "viscy" | |
options: "--check --verbose" | |
- uses: chartboost/ruff-action@v1 | |
with: | |
src: "viscy" | |
test: | |
name: Test | |
needs: [lint] | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ["3.10", "3.11", "3.12"] | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
python -m pip install --upgrade pip | |
# Install cpu wheels only to speed up the build | |
pip install torch torchvision --index-url https://download.pytorch.org/whl/cpu | |
pip install ".[metrics,dev]" | |
- name: Test with pytest | |
run: pytest -v |