Merge pull request #200 from marcelm/modernize

Switch to pyproject.toml

.github/workflows/pypi.yml

@@ -21,12 +21,9 @@ jobs:
         with:
           python-version: 3.9
 
-      - name: Install python packages
-        run: pip install setuptools
-
       - name: Build package
-        run: python setup.py sdist
-            
+        run: pipx run build
+
       - name: Publish to test PyPI
         if: startsWith(github.ref, 'refs/tags') != true
         uses: pypa/gh-action-pypi-publish@master

README.rst

@@ -36,7 +36,7 @@ or download a `release <https://github.com/mdshw5/pyfaidx/releases>`_ and:
 
 ::
 
-    python setup.py install
+    pip install .
 
 If using ``pip install --user`` make sure to add ``/home/$USER/.local/bin`` to your ``$PATH`` (on linux) or ``/Users/$USER/Library/Python/{python version}/bin`` (on macOS) if you want to run the ``faidx`` script.
 

pyproject.toml

@@ -0,0 +1,42 @@
+[build-system]
+requires = ["setuptools>=63", "setuptools_scm[toml]>=6.2"]
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "pyfaidx"
+authors = [
+    { name="Matthew Shirley", email="[email protected]"}
+]
+description = "pyfaidx: efficient pythonic random access to fasta subsequences"
+readme = "README.rst"
+requires-python = ">=3.7"
+license = {text = "BSD-3-Clause"}
+classifiers = [
+    "Development Status :: 5 - Production/Stable",
+    "License :: OSI Approved :: BSD License",
+    "Environment :: Console",
+    "Intended Audience :: Science/Research",
+    "Natural Language :: English",
+    "Operating System :: Unix",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.10",
+    "Programming Language :: Python :: 3.9",
+    "Programming Language :: Python :: 3.8",
+    "Programming Language :: Python :: 3.7",
+    "Programming Language :: Python :: Implementation :: PyPy",
+    "Topic :: Scientific/Engineering :: Bio-Informatics"
+]
+dependencies = [
+    "six"
+]
+dynamic = ["version"]
+
+[project.urls]
+"Homepage" = "https://github.com/mdshw5/pyfaidx/"
+"Author homepage" = "http://mattshirley.com"
+
+[project.scripts]
+faidx = "pyfaidx.cli:main"
+
+[tool.setuptools_scm]
+local_scheme = "no-local-version"