thomasmanke is testing #5
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Rintro2HTML | ||
| run-name: ${{ github.actor }} is testing | ||
| on: | ||
| push: | ||
| branches: ["2024.04"] | ||
| jobs: | ||
| build: | ||
| name: Conda Tests | ||
| runs-on: ubuntu-latest | ||
| defaults: | ||
| run: | ||
| shell: bash -l {0} | ||
| container: node:latest | ||
| steps: | ||
| - name: Print shell information | ||
| run: | | ||
| echo "Shell: $SHELL" | ||
| echo "Shell version: $($SHELL --version)" | ||
| uname -a || true | ||
| - uses: actions/checkout@v2 | ||
| - name: Check yaml | ||
| run: | | ||
| cat configs/conda.yml || true | ||
| - name: Install Conda environment with Micromamba | ||
| uses: mamba-org/setup-micromamba@main | ||
| with: | ||
| environment-file: configs/conda.yml | ||
| - name: List Available Environment | ||
| shell: bash -l {0} | ||
| run: micromamba list | ||
| - name: Activate Environment | ||
| run: micromamba activate Rintro | ||
| - name: Check Installation | ||
| run: | | ||
| echo "after conda activate Rintro: PATH=$PATH;" | ||
| which R || true | ||
| R --version || true | ||
| - name: Installation non-conda packages | ||
| run: | | ||
| Rscript -e 'install.packages("dslabs", repos="https://cloud.r-project.org")' | ||
| - name: Inspect dslabs ext_data | ||
| run: | | ||
| Rscript -e '.libPaths()' | ||
| Rscript -e 'find.package("dslabs")' | ||
| Rscript -e 'list.files(system.file(package="dslabs"))' | ||
| Rscript -e 'list.files(system.file("extdata", package="dslabs"))' | ||
| - name: Render quarto | ||
| continue-on-error: true. # only for error tracking | ||
| run: | | ||
| ls -Rl /github/home/micromamba/envs/Rintro/lib/R/library/dslabs | ||
| quarto render . | ||
| - name: Show all files | ||
| run: ls -Ral | ||
| - name: Upload | ||
| uses: actions/upload-pages-artifact@v3 | ||
| with: | ||
| path: ./docs | ||
| deploy: | ||
| needs: build | ||
| environment: | ||
| name: github-pages | ||
| url: ${{ steps.deployment.outputs.page_url }} | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Deploy to GitHub Pages | ||
| id: deployment | ||
| uses: actions/deploy-pages@v4 | ||
