brainglobe-utils

Shared general purpose tools for the BrainGlobe project, including citation generation.

Installation

pip install brainglobe-utils

To also include the dependencies required for napari, use:

pip install brainglobe-utils[napari]

For development, clone this repository and install the dependencies with one of the following commands:

pip install -e .[dev]
pip install -e .[dev,napari]

Citations for BrainGlobe tools

brainglobe-utils comes with the cite-brainglobe command line tool, to write citations for BrainGlobe tools for you so you don't need to worry about fetching the data yourself. You can read about how to use the tool on the documentation website.