fixing ruff errors

marschall-lab · Oct 8, 2024 · e3e0a3f · e3e0a3f
1 parent 94e45d7
commit e3e0a3f
Showing 1 changed file with 11 additions and 7 deletions.
diff --git a/gaftools/gfa.py b/gaftools/gfa.py
@@ -634,19 +634,23 @@ def path_exists(self, ordered_path):
         # ordered_path = path.replace(">", ",").replace("<", ",").split(",")
         # if ordered_path[0] == "":
         #     ordered_path = ordered_path[1:]
-        cases = {(">", ">"):("end", 0),
-                 ("<", "<"):("start", 1),
-                 (">", "<"):("end", 1),
-                 ("<", ">"):("start", 0)}
+        cases = {
+            (">", ">"): ("end", 0),
+            ("<", "<"): ("start", 1),
+            (">", "<"): ("end", 1),
+            ("<", ">"): ("start", 0),
+        }
 
         for i in range(1, len(ordered_path)):
-            n1 = ordered_path[i-1]
+            n1 = ordered_path[i - 1]
             n2 = ordered_path[i]
             try:
                 case = cases[(n1[0], n2[0])]
             except KeyError:
-                logging.error(f"Something went wrong when checking the path, make sure the path follows this example"
-                              f">node<node>node<nod")
+                logging.error(
+                    "Something went wrong when checking the path, make sure the path follows this example"
+                    ">node<node>node<nod"
+                )
                 return False
             ok = False
             for edge in getattr(self.nodes[n1[1:]], case[0]):