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Tutorial

Marcus Fedarko edited this page Aug 27, 2018 · 3 revisions

NOTE: This tutorial isn't finished yet, sorry. Please check back soon -- in the meantime, feel free to contact us with any questions about MetagenomeScope. Also, most of the later parts of this tutorial for STAMPS 2018 should be useful.

This tutorial is divided into two smaller tutorials, each of which focuses on one part of MetagenomeScope:

  1. Using MetagenomeScope's preprocessing script to convert an assembly graph file into a database file that can be visualized in MetagenomeScope's viewer interface.
  2. Visualizing a database file in MetagenomeScope's viewer interface.

Although these tutorials can be followed sequentially, either sub-tutorial can be used in isolation.