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  1. HAPDeNovo HAPDeNovo Public

    A haplotype based approach for filtering and phasing de novo mutations on barcoded linked read sequencing

    Python 5 3

  2. Aquila Aquila Public

    Diploid personal genome assembly and comprehensive variant detection based on linked-reads

    Python 20 8

  3. Aquila_stLFR Aquila_stLFR Public

    Human haplotype-resolved assembly and variant detection for stLFR, hybrid assembly for linked-reads

    Python 8 3

  4. MARS MARS Public

    A package for Multiple Samples Alignment-base SV Calling and Refinement

    Python 5