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Genera-with-Kraken2

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Provenance2 into paper
Genera-with-Kraken2 #133: Pull request #56 synchronize by lskatz
November 5, 2024 16:06 1m 11s provenance2
November 5, 2024 16:06 1m 11s
Provenance
Genera-with-Kraken2 #132: Pull request #54 synchronize by lskatz
November 4, 2024 20:28 1m 7s provenance2
November 4, 2024 20:28 1m 7s
Provenance
Genera-with-Kraken2 #131: Pull request #54 synchronize by lskatz
November 4, 2024 19:00 1m 5s provenance2
November 4, 2024 19:00 1m 5s
try to run CI
Genera-with-Kraken2 #130: Commit fa292f4 pushed by lskatz
November 4, 2024 18:54 Failure provenance2
November 4, 2024 18:54 Failure
v5.7.2
Genera-with-Kraken2 #129: Commit abba43a pushed by lskatz
November 1, 2024 15:46 1m 29s master
November 1, 2024 15:46 1m 29s
downloadKalamari.sh: nuccleotideAcc bug fuxed
Genera-with-Kraken2 #128: Commit f4ebffb pushed by lskatz
November 1, 2024 15:43 1m 2s master
November 1, 2024 15:43 1m 2s
Update README.md: remove CC license sticker
Genera-with-Kraken2 #127: Commit a13cd92 pushed by lskatz
July 15, 2024 13:17 1m 26s master
July 15, 2024 13:17 1m 26s
Change to MIT license
Genera-with-Kraken2 #126: Commit 200f33a pushed by lskatz
July 15, 2024 13:16 1m 53s master
July 15, 2024 13:16 1m 53s
update genome list; stable efetching (#49)
Genera-with-Kraken2 #125: Commit 2104a5d pushed by lskatz
June 5, 2024 20:02 1m 6s master
June 5, 2024 20:02 1m 6s
Merge branch 'dev' of github.com:lskatz/Kalamari into dev
Genera-with-Kraken2 #124: Commit 50c8120 pushed by lskatz
June 5, 2024 20:02 1m 27s dev
dev
June 5, 2024 20:02 1m 27s
Esearch input flag (#48)
Genera-with-Kraken2 #123: Commit 8cfa2e5 pushed by lskatz
June 5, 2024 19:59 1m 20s dev
dev
June 5, 2024 19:59 1m 20s
debug the ls statement
Genera-with-Kraken2 #122: Commit c3db028 pushed by lskatz
June 5, 2024 18:53 35s esearch-input
June 5, 2024 18:53 35s
debug the ls statement
Genera-with-Kraken2 #121: Commit e498971 pushed by lskatz
June 5, 2024 18:52 1m 19s esearch-input
June 5, 2024 18:52 1m 19s
debug the ls statement
Genera-with-Kraken2 #120: Commit 80fdaec pushed by lskatz
June 5, 2024 18:51 20s esearch-input
June 5, 2024 18:51 20s
update installation method for search with kraken2
Genera-with-Kraken2 #119: Commit 470398a pushed by lskatz
June 5, 2024 18:48 1m 23s esearch-input
June 5, 2024 18:48 1m 23s
bring in other tests
Genera-with-Kraken2 #118: Commit 3df9526 pushed by lskatz
June 5, 2024 18:44 33s esearch-input
June 5, 2024 18:44 33s
Esearch input (#47)
Genera-with-Kraken2 #117: Commit ee349d5 pushed by lskatz
June 5, 2024 18:09 35s dev
dev
June 5, 2024 18:09 35s
v5.6.3
Genera-with-Kraken2 #116: Commit 18033f7 pushed by lskatz
May 31, 2024 15:10 1m 2s master
May 31, 2024 15:10 1m 2s
bump version
Genera-with-Kraken2 #115: Commit 0778298 pushed by lskatz
May 27, 2024 01:20 1m 2s master
May 27, 2024 01:20 1m 2s
remove random single quotes
Genera-with-Kraken2 #114: Commit 1ea49ff pushed by lskatz
May 26, 2024 01:28 1m 13s master
May 26, 2024 01:28 1m 13s
Add genomes (#45) (#46)
Genera-with-Kraken2 #113: Commit 7d07557 pushed by lskatz
May 17, 2024 19:21 1m 7s master
May 17, 2024 19:21 1m 7s
Add genomes (#45)
Genera-with-Kraken2 #112: Commit c830a08 pushed by lskatz
May 17, 2024 18:23 1m 10s dev
dev
May 17, 2024 18:23 1m 10s
Validate taxonomy (#43)
Genera-with-Kraken2 #111: Commit 68f3fff pushed by lskatz
May 17, 2024 16:03 1m 36s master
May 17, 2024 16:03 1m 36s
Validate taxonomy (#43)
Genera-with-Kraken2 #110: Commit 68f3fff pushed by lskatz
May 17, 2024 13:58 1m 6s dev
dev
May 17, 2024 13:58 1m 6s
check on filtered tax in unit test
Genera-with-Kraken2 #109: Commit 0542efc pushed by lskatz
May 17, 2024 13:56 1m 4s validate-taxonomy
May 17, 2024 13:56 1m 4s