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Merge pull request #29 from lemaslab/xinsong
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README update
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XinsongDu authored Apr 1, 2020
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Expand Up @@ -75,7 +75,7 @@ Negative mode:
### Process your own data

- Save your positive data files to `data/POS/` and negative data to `data/NEG/`
- Create design files for positve data and negative data, indicating the group of each file. Sample design file can be found in `data/sample_data/pos_design.csv` and `data/sample_data/neg_design.csv`
- Create design files for positve data and negative data, indicating the group of each file, save them to `data/pos_design.csv` and `data/neg_design.csv`. Sample design file can be found in `data/sample_data/pos_design.csv` and `data/sample_data/neg_design.csv`
- Process your data with default parameters using local machine
```
nextflow main.nf -with-docker xinsongdu/lemaslab_rump:v0.0.0
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