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Data format conversion
Xinsong Du edited this page Oct 31, 2020
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MSconvert is used for data file format conversion. Steps of data conversion can be found in TidyMS documentation. Some commonly used metabolomics data formats are:
- NetCDF
- mzData
- mzXML
- RAW
Usage
- Setup your computer
- Installing
- Setup your projects with RUMP using local machine
- Setup your projects with RUMP using HiPerGator
- Setup your projects with RUMP using Amazon Web Service
- Executing time estimation
- Data processing parameters modification
Components
- Data collection/generation
- MODIS data quality control
- Data format conversion
- Data processing
- File format transformation
- Statistical analysis
- Unidentified metabolites search
- Pathway analysis
- Report generation
Developers