A Snakemake workflow for analyzing ePENS (ChIP-exo) data. It includes bigWig generation through bedtools and peak/border calling as well as border matching.
The usage of this workflow is described in the Snakemake Workflow Catalog.
If you use this workflow in a paper, don't forget to give credits to the authors by citing the URL of this (original) repository and its DOI (see above).