Merge pull request #10 from hannahgz/master

Modified line decode
kundajelab · Jun 27, 2019 · 7562c36 · 7562c36
2 parents 62c3955 + 095a498
commit 7562c36
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Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/setup.py b/setup.py
@@ -4,7 +4,7 @@
     'include_package_data': True,
     'description': 'Simulated datasets of DNA',
     'download_url': 'https://github.com/kundajelab/simdna',
-    'version': '0.4.3.1',
+    'version': '0.4.3.2',
     'packages': ['simdna', 'simdna.resources', 'simdna.synthetic'],
     'package_data': {'simdna.resources': ['encode_motifs.txt.gz', 'HOCOMOCOv10_HUMAN_mono_homer_format_0.001.motif.gz']},
     'setup_requires': [],

diff --git a/simdna/util.py b/simdna/util.py
@@ -98,7 +98,8 @@ def perform_action_on_each_line_of_file(
     i = 0;
     for line in file_handle:
         i += 1;
-        line = line.decode("utf-8")
+        if hasattr(line, "decode"): 
+            line = line.decode("utf-8")
         process_line(line, i, ignore_input_title,
                      transformation, action, progress_update)
         print_progress(progress_update, i, progress_update_file_name)