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proposed1576 | BA.5.2/BA.2.75/BA.5.2 #220

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ktmeaton opened this issue Jan 24, 2023 · 0 comments
Closed
1 task done

proposed1576 | BA.5.2/BA.2.75/BA.5.2 #220

ktmeaton opened this issue Jan 24, 2023 · 0 comments
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ktmeaton commented Jan 24, 2023

  • pango-designation issue: # 1576
  • covSPECTRUM query: TBD

Parents

Clade: Omicron/BA.5/22B,Omicron/BA.2.75/22D,Omicron/BA.5/22B
Lineage: BA.5.2.1*,CH.1.1*,BA.5.2.34*
Lineage Confidence: 0.606,0.225,0.613

Immunity

RBD Level: 4
RBD Substitutions: S:R346T,S:L452R,S:F486V,S:R493Q
Immune Escape: 0.6115
ACE2 Binding: 0.6426

Immune Escape Ranking

Higher values indicate an increased capacity to evade antibodies.

TBD

ACE2 Binding Ranking

Higher values indicate an increased capacity for viral entry into the host cell.

TBD

Alleles

proposed1576is successfully detected with thesc2rfmode forXBB`:

image

Breakpoints

Breakpoint 1: 5184:9865
Breakpoint 2: 22600:22628

breakpoints_clade

Tasks

  • resources/breakpoints.tsv Updated
@ktmeaton ktmeaton self-assigned this Jan 24, 2023
@ktmeaton ktmeaton moved this to In Progress in ncov-recombinant Jan 24, 2023
@ktmeaton ktmeaton added this to the v0.7.0 milestone Jan 24, 2023
@github-project-automation github-project-automation bot moved this from In Progress to Done in ncov-recombinant Jan 24, 2023
This was referenced Feb 22, 2023
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