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XBL | BA.2.75/XBB.1 #219

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ktmeaton opened this issue Jan 19, 2023 · 0 comments
Closed
1 task done

XBL | BA.2.75/XBB.1 #219

ktmeaton opened this issue Jan 19, 2023 · 0 comments
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ktmeaton commented Jan 19, 2023

  • pango-designation issue: #1532
  • covSPECTRUM query: TBD

Parents

Clade: Omicron/CJ.1,Omicron/XBB/22F
Lineage: BA.2.75*,XBB.1*
Lineage Confidence: 0.993,0.878

Immunity

RBD Level: 7
RBD Substitutions: S:R346T,S:V445P,S:G446S,S:N460K,S:F486P,S:F490S,S:R493Q
Immune Escape: 0.9070
ACE2 Binding: 1.0124

Immune Escape Ranking

Higher values indicate an increased capacity to evade antibodies.

TBD

ACE2 Binding Ranking

Higher values indicate an increased capacity for viral entry into the host cell.

TBD

Alleles

XBL is successfully detected with the sc2rf mode for XBL:

image

Breakpoints

Breakpoint 1: 5184:15737

breakpoints_lineage

Tasks

  • resources/breakpoints.tsv Updated
@ktmeaton ktmeaton changed the title XBL XBL | BA.2.75/XBB.1 Jan 24, 2023
@ktmeaton ktmeaton self-assigned this Jan 24, 2023
@ktmeaton ktmeaton moved this to In Progress in ncov-recombinant Jan 24, 2023
@ktmeaton ktmeaton added this to the v0.7.0 milestone Jan 24, 2023
@ktmeaton ktmeaton moved this from In Progress to Done in ncov-recombinant Jan 24, 2023
This was referenced Feb 22, 2023
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