Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

XBM | BA.2.76/BF.3 #215

Closed
1 task done
ktmeaton opened this issue Dec 19, 2022 · 0 comments
Closed
1 task done

XBM | BA.2.76/BF.3 #215

ktmeaton opened this issue Dec 19, 2022 · 0 comments
Assignees
Milestone

Comments

@ktmeaton
Copy link
Owner

ktmeaton commented Dec 19, 2022

  • pango-designation issue: #1441
  • covSPECTRUM query: TBD

Parents

Clade: Omicron/BA.2.76,Omicron/BA.5.2
Lineage: CH.1.1*,BF.3*
Lineage Confidence: 0.199,0.978

Immunity

RBD Level: 4
RBD Substitutions: S:R346T,S:L452R,S:F486V,S:R493Q
Immune Escape: 0.6014
ACE2 Binding: 0.6697

Immune Escape Ranking

Higher values indicate an increased capacity to evade antibodies.

TBD

ACE2 Binding Ranking

Higher values indicate an increased capacity for viral entry into the host cell.

TBD

Alleles

XBM is successfully detected with the sc2rf mode for voc:

image

Breakpoints

Breakpoint 1: 22600:22916

Tasks

  • resources/breakpoints.tsv Updated
@ktmeaton ktmeaton changed the title proposed1441 | BA.2.76/BF.3 XBM | BA.2.76/BF.3 Jan 19, 2023
@ktmeaton ktmeaton self-assigned this Jan 24, 2023
@ktmeaton ktmeaton moved this to In Progress in ncov-recombinant Jan 24, 2023
@ktmeaton ktmeaton added this to the v0.7.0 milestone Jan 24, 2023
@ktmeaton ktmeaton moved this from In Progress to Done in ncov-recombinant Jan 24, 2023
This was referenced Feb 22, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
Status: Done
Development

No branches or pull requests

1 participant