BioImage.IO Core: Execute PlantSeg-compatible models by nickname #247
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New: Predict with models from BioImage.IO Model Zoo
After Zenodo failed BioImage.IO and BioImage.IO's storage moved to EBI, this PR:
UNet3D
s andUNet2D
s trained withpytorch-3dunet
bioimageio.core
package now, but conda has no "extra"s like pip so it's made compulsoryThe next step is to discuss with BioImage.IO team about filtering models and make PlantSeg community partner.
Prediction with PlantSeg Custom/Official models in PlantSeg Zoo is not affected: