Update PGCGAP to v1.0.4 (bioconda#16031)

Package uploads complete: [ci skip] - biocontainers/pgcgap:1.0.4--0 - noarch/pgcgap-1.0.4-0.tar.bz2
kpalin · Aug 7, 2019 · c305cde · c305cde
1 parent 81c49e2
commit c305cde
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Showing 2 changed files with 6 additions and 4 deletions.
diff --git a/recipes/pgcgap/build.sh b/recipes/pgcgap/build.sh
@@ -8,6 +8,7 @@ cp Functions/Pan/fmplot.py $PREFIX/bin/
 cp Functions/COG/COG.pl $PREFIX/bin/
 cp Functions/COG/get_flag_relative_abundances_table.pl $PREFIX/bin/
 cp Functions/COG/Plot_COG.R $PREFIX/bin/
+cp Functions/COG/Plot_COG_Abundance.R $PREFIX/bin/
 
 cp Functions/ANI/get_ANImatrix.pl $PREFIX/bin/
 cp Functions/ANI/Plot_ANIheatmap.R $PREFIX/bin/
@@ -20,5 +21,5 @@ chmod a+x $PREFIX/bin/get_flag_relative_abundances_table.pl
 chmod a+x $PREFIX/bin/Plot_COG.R
 chmod a+x $PREFIX/bin/get_ANImatrix.pl
 chmod a+x $PREFIX/bin/Plot_ANIheatmap.R
-
+chmod a+x $PREFIX/bin/Plot_COG_Abundance.R
 pgcgap --version
diff --git a/recipes/pgcgap/meta.yaml b/recipes/pgcgap/meta.yaml
@@ -1,14 +1,13 @@
 {% set name = "pgcgap" %}
-{% set version = "1.0.3" %}
-{% set sha256 = "6221262d0de83284e4636488e385a953297ad5f3f470791cb20213bc752c0661" %}
+{% set version = "1.0.4" %}
 
 package:
   name: '{{ name }}'
   version: '{{ version }}'
 
 source:
   url: https://github.com/liaochenlanruo/pgcgap/archive/v{{ version }}.tar.gz
-  sha256: '{{ sha256 }}'
+  sha256: 100b17f46baf9cb3613275219c4f885229f8ddfd3d94cdc458aa65688a94b5aa
 
 build:
   number: 0
@@ -39,10 +38,12 @@ requirements:
     - perl-data-dumper >=2.173
     - perl-pod-usage >=1.69
     - perl-getopt-long >=2.50
+    - perl-parallel-forkmanager
     - htslib >=1.9
     - snippy >=4.3.6
     - sickle-trim >=1.33
     - r-ggplot2
+    - r-gplots
     - r-corrplot
     - matplotlib
     - seaborn