🔥 remove duplicate tool

kids-first · Feb 20, 2024 · e817d45 · e817d45
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commit e817d45
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diff --git a/sub_workflows/kfdrc_run_theta2_sub_wf.cwl b/sub_workflows/kfdrc_run_theta2_sub_wf.cwl
@@ -28,7 +28,7 @@ outputs:
 
 steps:
   bcftools_filter_combined_vcf:
-    run: ../tools/bcftools_filter_vcf.cwl
+    run: ../kf-annotation-tools/tools/bcftools_filter_vcf.cwl
     in:
       input_vcf: paired_vcf
       include_expression: combined_include_expression

diff --git a/tools/bcftools_filter_vcf.cwl b/tools/bcftools_filter_vcf.cwl