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kishorejaganathan authored Apr 28, 2021
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This package annotates genetic variants with their predicted effect on splicing, as described in [Jaganathan *et al*, Cell 2019 in press](https://doi.org/10.1016/j.cell.2018.12.015).

**Update**: The annotations for all possible substitutions, 1 base insertions, and 1-4 base deletions within genes are available [here](https://basespace.illumina.com/s/otSPW8hnhaZR) for download.
**Update**: The annotations for all possible substitutions, 1 base insertions, and 1-4 base deletions within genes are available [here](https://basespace.illumina.com/s/otSPW8hnhaZR) for download. These annotations are free for academic and not-for-profit use; other use requires a commercial license from Illumina, Inc.

### Installation
The simplest way to install SpliceAI is through pip or conda:
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