minor database updates

- added new compound which is used in reactions but not described yet
- some new bigg <-> seed exchange mappings

dat/SEED2VMH_translation_edited.csv

@@ -330,6 +330,16 @@ EX_cpd05235(e),EX_lgnc(e)
 EX_cpd05147(e),EX_i(e)
 EX_cpd19069(e),EX_pac(e)
 EX_cpd00508(e),EX_3mop(e)
+EX_cpd00116(e),EX_meoh(e)
+EX_cpd19047(e),EX_alac_S(e)
+EX_cpd03422(e),EX_cbi(e)
+EX_cpd00324(e),EX_ch4s(e)
+EX_cpd00425(e),EX_dma(e)
+EX_cpd00229(e),EX_gcald(e)
+EX_cpd00703(e),EX_ind3ac(e)
+EX_cpd00116(e),EX_meoh(e)
+EX_cpd00187(e),EX_mma(e)
+EX_cpd15837(e),EX_cbl1hbi(e)
 rxn00001,PPA
 rxn00002,ALPHNH
 rxn00006,r0010

dat/seed_metabolites_edited.tsv

@@ -27694,3 +27694,4 @@ cpd30797,5drp,5-deoxy-D-ribulose 1-phosphate,C5H11O7P,230,ModelSEED,null,0,0,0,n
 cpd31000,photon,Photon,Z,0,ModelSEED,null,0,1,0,null,0,0,0,,,null,null,null,null
 cpd90001,2fl,2-fucosyllactose,C18H32O15,488.439,pubchem,"InChI=1S/C18H32O15/c1-5-9(24)12(27)14(29)17(30-5)33-16-13(28)11(26)8(4-21)31-18(16)32-15(7(23)3-20)10(25)6(22)2-19/h2,5-18,20-29H,3-4H2,1H3/t5-,6-,7+,8+,9+,10+,11-,12+,13-,14-,15+,16+,17-,18-/m0/s1",0,0,0,null,0,10000000,10000000,,,null,null,null,CC1C(C(C(C(O1)OC2C(C(C(OC2OC(C(CO)O)C(C(C=O)O)O)CO)O)O)O)O)O
 cpd90002,"L-2,4-diketo-3-deoxyfuconate","L-2,4-diketo-3-deoxyfuconate",C6H7O5,10000000,gapseq.added,null,-1,1,0,null,0,10000000,10000000,,,null,null,null,null
+cpd32319,Fe-coproporphyrin III,Fe-coproporphyrin III,C36H32FeN4O8,704.518,Primary Database,SXDINBXHOHHTMY-RGGAHWMASA-H,-4,0,0,null,0,10000000,10000000,,,null,null,Name: Fe-coproporphyrin III; coproheme III|MetaCyc: CPD-17070,CC1=C(CCC(=O)[O-])C2=[N+]3C1=Cc1c(CCC(=O)[O-])c(C)c4n1[Fe-2]31n3c(c(C)c(CCC(=O)[O-])c3=CC3=[N+]1C(=C4)C(C)=C3CCC(=O)[O-])=C2