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Add google drive for download
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Juychen committed Jul 22, 2024
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It’s recommended to install the scDEAL under **Linux** and install the provided conda environment through the conda pack [Click here to download scdeal.tar.gz](https://portland-my.sharepoint.com/:u:/g/personal/junyichen8-c_my_cityu_edu_hk/EaOYJmIATDdFoI5wqcDJiVsBV8wtnved8LDP7pwqf7T5jQ?e=UHqeya). It’s recommended to install in your root conda environment - the conda pack command will then be available in all sub-environments as well.

[Click here to download scdeal.tar.gz](https://portland-my.sharepoint.com/:u:/g/personal/junyichen8-c_my_cityu_edu_hk/EaOYJmIATDdFoI5wqcDJiVsBV8wtnved8LDP7pwqf7T5jQ?e=UHqeya)
[Click here to download scdeal.tar.gz from onedrive](https://portland-my.sharepoint.com/:u:/g/personal/junyichen8-c_my_cityu_edu_hk/EaOYJmIATDdFoI5wqcDJiVsBV8wtnved8LDP7pwqf7T5jQ?e=UHqeya)


[Click here to download scdeal.tar.gz from google drive](https://drive.google.com/file/d/16tmJ0-4TUoKMn1RpXgKEZ9F8dvh8kh5Z/view?usp=sharing)

### Install with conda:
conda-pack is available from Anaconda as well as from conda-forge:
```
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### Data download
After setting up the home directory, you need to download other resources required for the run. Please create and download the zip format dataset from the [scDEAL.zip](https://portland-my.sharepoint.com/:u:/g/personal/junyichen8-c_my_cityu_edu_hk/ER2m5OXpYrdPngoAf06pqDoBsiuItm9yvAqg_CjHhNvKSA?e=ckLJ91) link inside:

[Click here to download scDEAL.zip](https://portland-my.sharepoint.com/:u:/g/personal/junyichen8-c_my_cityu_edu_hk/ER2m5OXpYrdPngoAf06pqDoBsiuItm9yvAqg_CjHhNvKSA?e=ckLJ91)
[Click here to download scDEAL.zip from onedrive](https://portland-my.sharepoint.com/:u:/g/personal/junyichen8-c_my_cityu_edu_hk/ER2m5OXpYrdPngoAf06pqDoBsiuItm9yvAqg_CjHhNvKSA?e=ckLJ91)

[Click here to download scDEAL.zip from google drive](https://drive.google.com/file/d/14mSE1GMi8N8BEt_3MQJSfQvMqg5PH5wI/view?usp=sharing)

The file "scDEAL.zip" includes all the datasets we have tested. Please extract the zip file and place the sub-directory "data" in the root directory of the "scDEAL" folder.
| | Author | Drug | GEO access | Cells | Species | Cancer type |
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