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bugfix
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jodyphelan committed Oct 17, 2024
1 parent aecaa4a commit 07a35b0
Showing 1 changed file with 0 additions and 2 deletions.
2 changes: 0 additions & 2 deletions scripts/combine_vcf_variants.py
Original file line number Diff line number Diff line change
Expand Up @@ -207,8 +207,6 @@ def has_md_tag(bam):
variant.info['SAF'] = hap_fwd
variant.info['SAR'] = hap_rev
if 'ADF' in var.samples[0]:
print(var)
print(hap_fwd,hap_rev)
variant.samples[0]['ADF'] = (ref_fwd,hap_fwd)
variant.samples[0]['ADR'] = (ref_rev,hap_rev)
if 'AD' in variant.samples[0]:
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