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GBWTGraph v0.2
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@jltsiren jltsiren released this 08 Nov 21:24
· 404 commits to master since this release
v0.2
e27ca7a
  • The minimizer index is now parametrized with a key type. In addition to the old 64-bit keys, there is an option to use 128-bit keys that support up to 63 bp minimizers.
  • GBWT construction from a greedy (maximum) path cover of an arbitrary graph. This can be used to build a GBWTGraph when true haplotypes are not available.
  • A variant of the path cover algorithm that samples the local haplotypes. This can be used to build a GBWTGraph without rare haplotypes.
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