forked from zarr-developers/zarr-python
-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Merge branch 'main' of https://github.com/zarr-developers/zarr-python …
…into refactor/store-mode
- Loading branch information
Showing
10 changed files
with
776 additions
and
22 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,135 @@ | ||
import dataclasses | ||
import textwrap | ||
from typing import Any, Literal | ||
|
||
import numcodecs.abc | ||
import numpy as np | ||
|
||
from zarr.abc.codec import Codec | ||
from zarr.core.metadata.v3 import DataType | ||
|
||
|
||
@dataclasses.dataclass(kw_only=True) | ||
class GroupInfo: | ||
""" | ||
Visual summary for a Group. | ||
Note that this method and its properties is not part of | ||
Zarr's public API. | ||
""" | ||
|
||
_name: str | ||
_type: Literal["Group"] = "Group" | ||
_zarr_format: Literal[2, 3] | ||
_read_only: bool | ||
_store_type: str | ||
_count_members: int | None = None | ||
_count_arrays: int | None = None | ||
_count_groups: int | None = None | ||
|
||
def __repr__(self) -> str: | ||
template = textwrap.dedent("""\ | ||
Name : {_name} | ||
Type : {_type} | ||
Zarr format : {_zarr_format} | ||
Read-only : {_read_only} | ||
Store type : {_store_type}""") | ||
|
||
if self._count_members is not None: | ||
template += "\nNo. members : {_count_members}" | ||
if self._count_arrays is not None: | ||
template += "\nNo. arrays : {_count_arrays}" | ||
if self._count_groups is not None: | ||
template += "\nNo. groups : {_count_groups}" | ||
return template.format(**dataclasses.asdict(self)) | ||
|
||
|
||
def human_readable_size(size: int) -> str: | ||
if size < 2**10: | ||
return f"{size}" | ||
elif size < 2**20: | ||
return f"{size / float(2**10):.1f}K" | ||
elif size < 2**30: | ||
return f"{size / float(2**20):.1f}M" | ||
elif size < 2**40: | ||
return f"{size / float(2**30):.1f}G" | ||
elif size < 2**50: | ||
return f"{size / float(2**40):.1f}T" | ||
else: | ||
return f"{size / float(2**50):.1f}P" | ||
|
||
|
||
def byte_info(size: int) -> str: | ||
if size < 2**10: | ||
return str(size) | ||
else: | ||
return f"{size} ({human_readable_size(size)})" | ||
|
||
|
||
@dataclasses.dataclass(kw_only=True) | ||
class ArrayInfo: | ||
""" | ||
Visual summary for an Array. | ||
Note that this method and its properties is not part of | ||
Zarr's public API. | ||
""" | ||
|
||
_type: Literal["Array"] = "Array" | ||
_zarr_format: Literal[2, 3] | ||
_data_type: np.dtype[Any] | DataType | ||
_shape: tuple[int, ...] | ||
_chunk_shape: tuple[int, ...] | None = None | ||
_order: Literal["C", "F"] | ||
_read_only: bool | ||
_store_type: str | ||
_compressor: numcodecs.abc.Codec | None = None | ||
_filters: tuple[numcodecs.abc.Codec, ...] | None = None | ||
_codecs: list[Codec] | None = None | ||
_count_bytes: int | None = None | ||
_count_bytes_stored: int | None = None | ||
_count_chunks_initialized: int | None = None | ||
|
||
def __repr__(self) -> str: | ||
template = textwrap.dedent("""\ | ||
Type : {_type} | ||
Zarr format : {_zarr_format} | ||
Data type : {_data_type} | ||
Shape : {_shape} | ||
Chunk shape : {_chunk_shape} | ||
Order : {_order} | ||
Read-only : {_read_only} | ||
Store type : {_store_type}""") | ||
|
||
kwargs = dataclasses.asdict(self) | ||
if self._chunk_shape is None: | ||
# for non-regular chunk grids | ||
kwargs["chunk_shape"] = "<variable>" | ||
if self._compressor is not None: | ||
template += "\nCompressor : {_compressor}" | ||
|
||
if self._filters is not None: | ||
template += "\nFilters : {_filters}" | ||
|
||
if self._codecs is not None: | ||
template += "\nCodecs : {_codecs}" | ||
|
||
if self._count_bytes is not None: | ||
template += "\nNo. bytes : {_count_bytes}" | ||
kwargs["_count_bytes"] = byte_info(self._count_bytes) | ||
|
||
if self._count_bytes_stored is not None: | ||
template += "\nNo. bytes stored : {_count_bytes_stored}" | ||
kwargs["_count_stored"] = byte_info(self._count_bytes_stored) | ||
|
||
if ( | ||
self._count_bytes is not None | ||
and self._count_bytes_stored is not None | ||
and self._count_bytes_stored > 0 | ||
): | ||
template += "\nStorage ratio : {_storage_ratio}" | ||
kwargs["_storage_ratio"] = f"{self._count_bytes / self._count_bytes_stored:.1f}" | ||
|
||
if self._count_chunks_initialized is not None: | ||
template += "\nChunks Initialized : {_count_chunks_initialized}" | ||
return template.format(**kwargs) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Oops, something went wrong.