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SLURM improvements

SLURM improvements #33

Workflow file for this run

name: "Test"
on:
pull_request:
push:
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true
jobs:
test:
runs-on: ubuntu-latest
timeout-minutes: 15
services:
# Add a mysql databse for SLURM to use
mysql:
image: mysql:8.0
env:
MYSQL_ROOT_PASSWORD: root
ports:
- "8888:3306"
options: --health-cmd="mysqladmin ping" --health-interval=10s --health-timeout=5s --health-retries=3
steps:
- uses: actions/checkout@v2
- name: Setup Python
uses: actions/setup-python@v2
with:
python-version: "3.10"
- name: Setup MPI
uses: mpi4py/setup-mpi@v1
- name: Setup SLURM
uses: koesterlab/setup-slurm-action@v1
- name: Print SLURM info
run: sinfo -Nel
- name: Install hatch
run: pipx install hatch
- name: Run tests
run: hatch run test:run
- name: Debug SLURM queue
if: always()
run: squeue