replace files deleted somhow!

Dockerfile

@@ -0,0 +1,28 @@
+FROM python:3-slim
+WORKDIR /app
+COPY ./.github/actions/github_action_main.py .
+COPY ./tools ./tools
+COPY ./vocabulary ./vocabulary
+COPY ./docs  ./docs
+COPY ./cache ./cache
+
+# RUN chmod a+x /app/github_action_main.py
+RUN chmod a+x /app/github_action_main.py
+
+# Quarto install instructions from https://www.r-bloggers.com/2022/07/how-to-set-up-quarto-with-docker-part-1-static-content/
+RUN apt-get update && apt-get install -y --no-install-recommends \
+    curl \
+    gdebi-core \
+    && rm -rf /var/lib/apt/lists/*
+
+RUN pip install -r /app/tools/requirements.txt
+
+RUN curl -LO https://quarto.org/download/latest/quarto-linux-amd64.deb
+RUN gdebi --non-interactive quarto-linux-amd64.deb
+
+ENV PYTHONPATH /app
+ENTRYPOINT ["/app/github_action_main.py"]
+
+# This is for debugging the Docker image build process, ensures the container stays up
+# ENTRYPOINT ["tail", "-f", "/dev/null"]
+

action.yml

@@ -0,0 +1,39 @@
+# action.yml
+# see https://docs.github.com/en/actions/creating-actions/metadata-syntax-for-github-actions
+#  for information on how this works
+
+name: 'Vocabulary Action'
+author: 'Dave Vieglais( https://orcid.org/0000-0002-6513-4996), 
+         Stephen M Richard (https://orcid.org/0000-0001-6041-5302)'
+description: 'creates a docker container to run python routines that 
+       1) load skos (rdf/turtle) vocabularies into an sqlAlchmey
+       2) generate markdown from the skos vocabularies using Quarto markdown'
+inputs:
+  action:  
+    description: 'Which action to run -- defaults to uijson'
+    required: true
+    default: 'uijson'
+  path: 
+    description: 'Path to the output directory for script output'
+    required: true
+  inputttl:
+    description: 'list of skos rdf/turtle files **without** the .ttl extension'
+    required: true
+  inputvocaburi:
+    description: 'list of ConceptScheme URIs for the skos vocabularies in this repo. 
+                   The URIs will be matched with the SKOS files based on order'
+    required: true
+
+runs:   # see https://docs.github.com/en/actions/creating-actions/metadata-syntax-for-github-actions#runs-for-docker-container-actions
+        #   for documentation
+  using: 'docker'
+  image: './Dockerfile'
+  # To access the environment variable in a Docker container action, you must pass
+  #  the input using the args keyword in the action.yml metadata file.
+  #  For more information about the action metadata file for Docker container actions,
+  #  see "Creating a Docker container action."
+  args:
+    - ${{ inputs.action }}
+    - ${{ inputs.path }}
+    - ${{ inputs.inputttl }}
+    - ${{ inputs.inputvocaburi }}