[PPML] Branch2.1 upgrade occlum to 0.29.5 (#7642)

* upgrade 0.29.5 * add and set malloc_max * update others
intel-analytics · Feb 23, 2023 · 4ee00e7 · 4ee00e7
1 parent 70ab45c
commit 4ee00e7
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Showing 3 changed files with 16 additions and 3 deletions.
diff --git a/ppml/trusted-big-data-ml/scala/docker-occlum/Dockerfile b/ppml/trusted-big-data-ml/scala/docker-occlum/Dockerfile
@@ -158,7 +158,7 @@ RUN cd /opt && \
     sed -i 's/2.4.0/3.1.2/g' tpch.sbt && \
     sbt package
 
-FROM occlum/occlum:0.28.1-ubuntu20.04 as ppml
+FROM occlum/occlum:0.29.5-ubuntu20.04 as ppml
 
 ARG BIGDL_VERSION=2.1.0
 ARG SPARK_VERSION

diff --git a/ppml/trusted-big-data-ml/scala/docker-occlum/entrypoint.sh b/ppml/trusted-big-data-ml/scala/docker-occlum/entrypoint.sh
@@ -18,6 +18,12 @@ if [ -z "$uidentry" ] ; then
     fi
 fi
 
+#check glic ENV MALLOC_ARENA_MAX for k8s
+if [[ -z "$MALLOC_ARENA_MAX" ]]; then
+    echo "No MALLOC_ARENA_MAX specified, set to 1."
+    export MALLOC_ARENA_MAX=1
+fi
+
 # check occlum log level for k8s
 export ENABLE_SGX_DEBUG=false
 export OCCLUM_LOG_LEVEL=off

diff --git a/ppml/trusted-big-data-ml/scala/docker-occlum/run_spark_on_occlum_glibc.sh b/ppml/trusted-big-data-ml/scala/docker-occlum/run_spark_on_occlum_glibc.sh
@@ -45,8 +45,9 @@ init_instance() {
         .process.default_heap_size = "SGX_HEAP" |
         .metadata.debuggable = "ENABLE_SGX_DEBUG" |
         .resource_limits.kernel_space_heap_size="SGX_KERNEL_HEAP" |
+        .resource_limits.kernel_space_heap_max_size="SGX_KERNEL_HEAP" |
         .entry_points = [ "/usr/lib/jvm/java-8-openjdk-amd64/bin" ] |
-        .env.untrusted = [ "DMLC_TRACKER_URI", "SPARK_DRIVER_URL", "SPARK_TESTING" , "_SPARK_AUTH_SECRET" ] |
+        .env.untrusted = [ "MALLOC_ARENA_MAX", "DMLC_TRACKER_URI", "SPARK_DRIVER_URL", "SPARK_TESTING" , "_SPARK_AUTH_SECRET" ] |
         .env.default = [ "LD_LIBRARY_PATH=/usr/lib/jvm/java-8-openjdk-amd64/lib/server:/usr/lib/jvm/java-8-openjdk-amd64/lib:/usr/lib/jvm/java-8-openjdk-amd64/../lib:/lib","SPARK_CONF_DIR=/opt/spark/conf","SPARK_ENV_LOADED=1","PYTHONHASHSEED=0","SPARK_HOME=/opt/spark","SPARK_SCALA_VERSION=2.12","SPARK_JARS_DIR=/opt/spark/jars","LAUNCH_CLASSPATH=/bin/jars/*",""]' Occlum.json)" && \
     echo "${new_json}" > Occlum.json
     echo "SGX_MEM_SIZE ${SGX_MEM_SIZE}"
@@ -100,6 +101,12 @@ init_instance() {
         fi
     fi
 
+    #check glic ENV MALLOC_ARENA_MAX for docker
+    if [[ -z "$MALLOC_ARENA_MAX" ]]; then
+        echo "No MALLOC_ARENA_MAX specified, set to 1."
+        export MALLOC_ARENA_MAX=1
+    fi
+
     # check occlum log level for docker
     export ENABLE_SGX_DEBUG=false
     export OCCLUM_LOG_LEVEL=off
@@ -355,7 +362,7 @@ run_spark_gbt() {
     build_spark
     echo -e "${BLUE}occlum run BigDL Spark GBT${NC}"
     occlum run /usr/lib/jvm/java-8-openjdk-amd64/bin/java \
-                -XX:-UseCompressedOops -XX:MaxMetaspaceSize=$META_SPACE \
+                -XX:-UseCompressedOops \
                 -XX:ActiveProcessorCount=4 \
                 -Divy.home="/tmp/.ivy" \
                 -Dos.name="Linux" \