Debug trimmed msa comparisons #159
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| on: | |
| push: | |
| paths: | |
| - 'dataset/**' | |
| - 'scripts/**' | |
| - 'source/**' | |
| pull_request: | |
| paths: | |
| - 'dataset/**' | |
| - 'scripts/**' | |
| - 'source/**' | |
| name: Build | |
| jobs: | |
| build_and_test_windows: | |
| runs-on: windows-2022 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Download Release Binaries | |
| run: | | |
| curl -L -o trimal.zip https://github.com/inab/trimal/releases/download/v1.5.0/trimAl_Windows_x86-64.zip | |
| - name: Unzip Binaries | |
| run: | | |
| powershell -Command "Expand-Archive -Path trimal.zip -DestinationPath ." | |
| - name: List Directory Contents | |
| run: | | |
| dir .\ | |
| - name: Verify Binaries | |
| run: | | |
| # Use PowerShell or native Windows commands to verify binaries | |
| Get-Command .\trimal.exe | |
| - name: Run generate_trimmed_msas.ps1 | |
| run: | | |
| powershell -ExecutionPolicy Bypass -File .\scripts\generate_trimmed_msas.ps1 | |
| - name: Run compare_trimmed_msas.ps1 | |
| run: | | |
| powershell -ExecutionPolicy Bypass -File .\scripts\compare_trimmed_msas.ps1 |