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docs(tutorial): deploy a jupyterlite repl on the website (#9009)
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cpcloud authored Apr 22, 2024
1 parent 33286f2 commit 9355281
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3 changes: 3 additions & 0 deletions .github/workflows/ibis-docs-main.yml
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Expand Up @@ -45,6 +45,9 @@ jobs:
- name: build docs
run: nix develop --ignore-environment --keep HOME -c just docs-render

- name: build jupyterlite
run: nix develop --ignore-environment --keep HOME -c just build-jupyterlite

- name: check that all frozen computations were done before push
run: git diff --exit-code --stat

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3 changes: 3 additions & 0 deletions .github/workflows/ibis-docs-pr.yml
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Expand Up @@ -47,6 +47,9 @@ jobs:
- name: build docs
run: nix develop --ignore-environment --keep HOME -c just docs-render

- name: build jupyterlite
run: nix develop --ignore-environment --keep HOME -c just build-jupyterlite

- name: check that all frozen computations were done before push
run: git diff --exit-code --stat

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4 changes: 4 additions & 0 deletions .gitignore
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Expand Up @@ -147,3 +147,7 @@ docs/**/.jupyter_cache
# quarto generated files
docs/posts-listing.json
docs/posts.feed-full-staged
docs/**/*.html

# jupyterlite stuff
.jupyterlite.doit.db
1 change: 1 addition & 0 deletions docs/_quarto.yml
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Expand Up @@ -107,6 +107,7 @@ website:
contents:
- install.qmd
- auto: tutorials/*.qmd
- auto: tutorials/browser
- auto: tutorials/cloud-data-platforms
- auto: tutorials/open-source-software
- id: concepts
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9 changes: 9 additions & 0 deletions docs/_tabsets/repl_warning.qmd
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@@ -0,0 +1,9 @@
::: {.callout-warning collapse="true"}
## Ibis in the browser is experimental.

iOS is known to cause crashes on this page.

Mobile Firefox may also not work (the page won't crash though).

Please [open an issue on GitHub](https://github.com/ibis-project/ibis/issues/new/choose) if you encounter problems.
:::
8 changes: 8 additions & 0 deletions docs/ibis-wasm-wheels_cors_config.json
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@@ -0,0 +1,8 @@
[
{
"origin": ["*"],
"method": ["GET"],
"responseHeader": ["Content-Type"],
"maxAgeSeconds": 3600
}
]
8 changes: 8 additions & 0 deletions docs/jupyter_lite_config.json
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@@ -0,0 +1,8 @@
{
"PipliteAddon": {
"piplite_urls": [
"https://duckdb.github.io/duckdb-pyodide/wheels/duckdb-0.10.2-cp311-cp311-emscripten_3_1_46_wasm32.whl",
"dist/ibis_framework-8.0.0-py3-none-any.whl"
]
}
}
7 changes: 7 additions & 0 deletions docs/styles.css
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Expand Up @@ -14,3 +14,10 @@ section[id^="parameters-"] {
vertical-align: -0.125em;
width: 1em;
}

#jupyterlite-console {
width: 100%;
height: 95%;
margin: auto;
display: block;
}
44 changes: 44 additions & 0 deletions docs/tutorials/browser/repl.qmd
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@@ -0,0 +1,44 @@
---
title: JupyterLite console
format:
html:
page-layout: full
---

Try our experimental JupyterLite console with Ibis, using the Palmer
penguins[^1] dataset loaded into the DuckDB backend!

{{< include ../../_tabsets/repl_warning.qmd >}}

```{python}
#| echo: false
#| output: asis
from urllib.parse import urlencode
lines = """
%pip install numpy pandas tzdata
import pyodide_js, pathlib, js
await pyodide_js.loadPackage("https://storage.googleapis.com/ibis-wasm-wheels/pyarrow-16.0.0.dev2661%2Bg9bddb87fd-cp311-cp311-emscripten_3_1_46_wasm32.whl")
pathlib.Path("penguins.csv").write_text(await (await js.fetch("https://storage.googleapis.com/ibis-tutorial-data/penguins.csv")).text())
del pyodide_js, pathlib, js
%clear
%pip install 'ibis-framework[duckdb]'
from ibis.interactive import *
penguins = ibis.read_csv("penguins.csv")
penguins
"""
params = [
("toolbar", "1"),
("theme", "JupyterLab Night"),
("kernel", "python"),
]
params.extend(("code", line) for line in lines.splitlines() if line)
query = urlencode(params)
jupyterlite = f"../../jupyterlite/repl/?{query}"
iframe = f'<iframe src="{jupyterlite}" id="jupyterlite-console"></iframe>'
print(iframe)
```

[^1]: Horst AM, Hill AP, Gorman KB (2020). palmerpenguins: Palmer Archipelago (Antarctica) penguin data. R package version 0.1.0. <https://allisonhorst.github.io/palmerpenguins/>. doi: 10.5281/zenodo.3960218.
1 change: 1 addition & 0 deletions gen_redirects.py
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Expand Up @@ -169,6 +169,7 @@
"/versioning": "/concepts/versioning",
"/why_ibis/": "/why",
"/tutorials/data-platforms/": "tutorials/cloud-data-platforms/",
"/repl": "/tutorials/browser/repl",
# TODO: "/how_to/memtable-join/": "/how_to/memtable_join/",
# TODO: "/how_to/memtable_join/"
# TODO: "/reference/backends/base/"
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43 changes: 42 additions & 1 deletion justfile
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Expand Up @@ -9,6 +9,8 @@ clean:
# lock dependencies without updating existing versions
lock:
#!/usr/bin/env bash
set -euo pipefail
required_version="1.8.2"
version="$(poetry --version)"
if ! grep -qF "${required_version}" <<< "${version}"; then
Expand Down Expand Up @@ -39,7 +41,7 @@ ci-check *args:
# lint code
lint:
ruff format -q . --check
ruff .
ruff check .

# run the test suite for one or more backends
test +backends:
Expand All @@ -56,6 +58,7 @@ test +backends:

_doctest runner *args:
#!/usr/bin/env bash
set -euo pipefail
# TODO(cpcloud): why doesn't pytest --ignore-glob=test_*.py work?
{{ runner }} pytest --doctest-modules {{ args }} $(
Expand All @@ -80,6 +83,8 @@ ci-doctest *args:
# download testing data
download-data owner="ibis-project" repo="testing-data" rev="master":
#!/usr/bin/env bash
set -euo pipefail
outdir="{{ justfile_directory() }}/ci/ibis-testing-data"
rm -rf "$outdir"
url="https://github.com/{{ owner }}/{{ repo }}"
Expand Down Expand Up @@ -109,6 +114,8 @@ reup *backends:
# stop and remove containers; clean up networks and volumes
down *backends:
#!/usr/bin/env bash
set -euo pipefail
if [ -z "{{ backends }}" ]; then
docker compose down --volumes --remove-orphans
else
Expand All @@ -130,11 +137,15 @@ benchcmp number *args:
# check for invalid links in a locally built version of the docs
checklinks *args:
#!/usr/bin/env bash
set -euo pipefail
lychee --base docs/_output $(find docs/_output -name '*.html') {{ args }}

# view the changelog for upcoming release (use --pretty to format with glow)
view-changelog flags="":
#!/usr/bin/env bash
set -euo pipefail
npx -y -p conventional-changelog-cli \
-- conventional-changelog --config ./.conventionalcommits.js \
| ([ "{{ flags }}" = "--pretty" ] && glow -p - || cat -)
Expand Down Expand Up @@ -169,10 +180,40 @@ docs-api-preview:
docs-deploy:
quarto publish --no-prompt --no-browser --no-render netlify docs

# build an ibis_framework wheel that works with pyodide
build-ibis-for-pyodide:
#!/usr/bin/env bash
set -euo pipefail
# TODO(cpcloud): remove when:
# 1. pyarrow release contains pyodide
# 2. ibis supports this version of pyarrow
rm -rf dist/
poetry add 'pyarrow>=10.0.1' --allow-prereleases
poetry build --format wheel
git checkout poetry.lock pyproject.toml

# build the jupyterlite deployment
build-jupyterlite: build-ibis-for-pyodide
#!/usr/bin/env bash
set -euo pipefail
mkdir -p docs/_output/jupyterlite
jupyter lite build \
--debug \
--no-libarchive \
--config docs/jupyter_lite_config.json \
--output-dir docs/_output/jupyterlite
# jupyter lite build can copy from the nix store, and preserves the
# original write bit; without this the next run of this rule will result in
# a permission error when the build tries to remove existing files
chmod -R u+w docs/_output/jupyterlite

# run the entire docs build pipeline
docs-build-all:
just docs-apigen --verbose
just docs-render
just build-jupyterlite
just checklinks docs/_output --offline --no-progress

# open chat
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