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Fix operations with no up or download #192

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merged 2 commits into from
Jun 17, 2024
Merged

Fix operations with no up or download #192

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ac7bd17
Fix operations with no up or download
qubixes Jun 17, 2024
b86f802
Placate pylint
qubixes Jun 17, 2024
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6 changes: 4 additions & 2 deletions ibridges/data_operations.py
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Original file line number Diff line number Diff line change
Expand Up @@ -374,12 +374,14 @@ def perform_operations(session: Session, operations: dict, ignore_err: bool=Fals
"""
up_sizes = [lpath.stat().st_size for lpath, _ in operations["upload"]]
down_sizes = [ipath.size for ipath, _ in operations["download"]]
pbar = tqdm(total=sum(up_sizes) + sum(down_sizes), unit="B", unit_scale=True, unit_divisor=1024)
disable = len(up_sizes) + len(down_sizes) == 0
pbar = tqdm(total=sum(up_sizes) + sum(down_sizes), unit="B", unit_scale=True, unit_divisor=1024,
disable=disable)

# For large files, the checksum computation might take too long, which can result in a timeout.
# This is why we increase the time out from file sizes > 1 GB
# This might still result in a time out if your server is very busy or a potato.
max_size = max([*up_sizes, *down_sizes])
max_size = max([*up_sizes, *down_sizes, 0])
original_timeout = session.irods_session.pool.connection_timeout
if max_size > 1e9 and original_timeout == DEFAULT_CONNECTION_TIMEOUT:
session.irods_session.pool.connection_timeout = int(
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