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This is a major (10yr overdue) refactoring of the core processing of AXML/ARSC in Apktool. This removes the logic that required chunks to be in a specific order as well as revamps chunk loading to handle unknown data reading to survive common obfuscation techniques.
We may have regressed some things, but I'd rather get this merged with the cleaner and more understood codebase and iterate on discovered regressions.