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Add shuffling in Nanotron for subsequent epochs when data is repeated #247

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@Lauler Lauler commented Nov 24, 2024

Nanoset's index builder does not re-shuffle dataset and sample indices within epochs when training secondary, third, etc epochs. It instead concatenates a copy of the same indices for any repeated data. This PR adds unique within-epoch shuffling for each epoch.

See the following issue: #237

I ran the tests in tests/nanotron:

=========================================================================== warnings summary ===========================================================================
tests/helpers/context.py:7: 35 warnings
  /home/faton/projects/text/nanotron_dev/nanotron/tests/helpers/context.py:7: PytestCollectionWarning: cannot collect test class 'TestContext' because it has a __init__ constructor (from: nanoset/test_build_nanoset_dataloader.py)
    class TestContext:

-- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html
=================================================================== 12 passed, 35 warnings in 44.55s ===================================================================

@TJ-Solergibert

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@NouamaneTazi NouamaneTazi left a comment

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Nice catch! LGTM 🤗
Minor sugg before merging


# Shuffle indices in each epoch with different random seeds and concatenate them
r = np.random.RandomState(self.random_seed)
epoch_random_seeds = r.randint(0, 2**32 - 1, num_epochs)
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Can we just use self.random_seed + num_epoch for easier reproducibility?

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Good suggestion, makes it a lot simpler and clearer what's going on. I've changed the code to incorporate this in latest commit:

dataset_indices = []
dataset_sample_indices = []
for num_epoch in range(num_epochs):
# Shuffle the sample and dataset indices in epoch with a given seed
numpy_random_state = np.random.RandomState(self.random_seed + num_epoch)
numpy_random_state.shuffle(dataset_index)
numpy_random_state = np.random.RandomState(self.random_seed + num_epoch)
numpy_random_state.shuffle(dataset_sample_index)

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