Code

Seurat upload#411

Code

Merged

alexvpickering merged 27 commits intomasterhms-dbmi-cellenics/api:masterfrom seurat-uploadhms-dbmi-cellenics/api:seurat-uploadCopy head branch name to clipboardDec 5, 2022

+1,786-55

Commits

Commits on Aug 31, 2022

• add seurat as sample tech

  alexvpickering

  committed
  0994a2a

• init adding seurat enum

  alexvpickering

  committed
  c23e64e

Commits on Sep 6, 2022

• add sample_file_type to migration

  alexvpickering

  committed
  5034dd5

• remove double blank line

  alexvpickering

  committed
  b492073

Commits on Sep 7, 2022

• init seurat pipeline boilerplate

  alexvpickering

  committed
  36715e7

• add seurat backend status

  alexvpickering

  committed
  977e857

• add seurat as pipeline_type

  alexvpickering

  committed
  9b55959

• add seurat to pipeline status; seurat pipeline is created

  alexvpickering

  committed
  c615940

• move SEURATResponse yaml

  alexvpickering

  committed
  93ac876

Commits on Sep 14, 2022

• seurat pipeline sends updates; embedding work request adapted for seurat

  alexvpickering

  committed
  0fe0575

Commits on Sep 23, 2022

• fix tests

  alexvpickering

  committed
  cacc577

Commits on Sep 26, 2022

• multipart upload works for large seurat objects

  alexvpickering

  committed
  663fcbb

Commits on Oct 31, 2022

• comment out tests to check staging

  alexvpickering

  committed
  5ab2edc

• try fix out of memory in api

  alexvpickering

  committed
  72c1d84

Commits on Nov 1, 2022

• add logging

  alexvpickering

  committed
  c756fb4

• add logging

  alexvpickering

  committed
  7e6c408

Commits on Nov 2, 2022

• add seurat tests

  alexvpickering

  committed
  c54e0db

Commits on Nov 4, 2022

• remove debug messages

  alexvpickering

  committed
  e0dc827

Commits on Nov 8, 2022

• improve naming

  alexvpickering

  committed
  940f021

Commits on Nov 14, 2022

• adding tests

  alexvpickering

  committed
  9dcdef0

Commits on Nov 15, 2022

• add sampleFile tests for completeMultipartUpload

  alexvpickering

  committed
  6405026

• add seuratController tests

  alexvpickering

  committed
  c623e30

• test seurat pipeline helpers

  alexvpickering

  committed
  d9d0584

• add tests; rename completeMultiPartUpload --> completeMultipartUpload

  alexvpickering

  committed
  cfff3da

Commits on Nov 17, 2022

• fix notification emails for seurat; add tests

  alexvpickering

  committed
  e074cc2

Commits on Nov 28, 2022

• fix returned file name

  alexvpickering

  committed
  e1d2d23

Commits on Dec 2, 2022

• Merge branch 'master' into seurat-upload

  alexvpickering

  authored
  28447db