[3.x] Address maven 3.9.2 plugin issues.

[Tomas-Kraus]

No description provided.

[Tomas-Kraus]

@romain-grecourt I'd like to fix few more things. Unfortunately backport of changeset does not work so I have to update plugins manually and make sure that changes do not break anything.

Edit: There are still some warnings, maybe I'll be able to fix few more:

• io.helidon.build-tools:helidon-services-plugin - need to release helidon build tools where fix is available
• io.helidon.build-tools:snakeyaml-codegen-maven-plugin - need to release helidon build tools where fix is available
• org.codehaus.mojo:jaxb2-maven-plugin:2.5.0 - can't do much with this one
• org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:0.14.0 - can't do much with this one
• org.xolstice.maven.plugins:protobuf-maven-plugin:0.6.1 - there is latest version which still triggers warnings
• org.apache.maven.plugins:maven-javadoc-plugin:3.5.0 - updated to latest
  • Mojo javadoc:jar (org.apache.maven.plugins.javadoc.JavadocJar)
    [WARNING] - Parameter 'isOffline' is read-only, must not be used in configuration - fixed
• org.commonjava.maven.plugins:directory-maven-plugin:1.0 - there is latest version which still triggers warnings
• org.jboss.jandex:jandex-maven-plugin:1.2.3 - updated to latest, we have problem with our poms, but fix broke TCK
  Parameter 'classesDir' is read-only, must not be used in configuration - removal causes build failure
• org.apache.maven.plugins:maven-failsafe-plugin:3.0.0-M5 - update to later version causes build failure
  Parameter 'localRepository' uses deprecated parameter expression '${localRepository}': ArtifactRepository type is deprecated and its use in Mojos should be avoided.
• org.apache.maven.plugins:maven-jar-plugin:3.0.2 - update to later version causes build failure
• org.hibernate.orm.tooling:hibernate-enhance-maven-plugin:6.1.7.Final - update to later version causes build failure

[Tomas-Kraus]

Let's merge it now. Anything else broke the build.