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Update AllFunders_Understanding_chromatin_biology_usingHTS.md
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mariasimoneau authored Sep 25, 2024
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# Understanding chromatin biology using high-throughput sequencing workshop (2024)
# Understanding chromatin biology using high-throughput sequencing workshop

*Note: In 2024, some workshops will be taught in person and others will be online via Zoom.*
*Note: Some HBC workshops are taught in person and others online via Zoom.*


### **IN-PERSON Workshop dates and times (Longwood Medical Area):**
<!-- ### **IN-PERSON Workshop dates and times (Longwood Medical Area):** -->
### **ONLINE Workshop dates and times:**

**Tuesday, September 17, 2024:** 9:30AM-12PM
**Friday, May 2, 2025:** 9:30AM-12PM

**Friday, September 20, 2024:** 9:30AM-12PM
**Tuesday, May 6, 2025:** 9:30AM-12PM

**Tuesday, September 24, 2024:** 9:30AM-12PM
**Friday, May 9, 2025:** 9:30AM-12PM


_Instruction will be mostly learner-centric, requiring a time commitment between the workshop sessions!_
Expand All @@ -34,24 +35,31 @@ This 3-day hands-on workshop will begin with a basic introduction of concepts re

### **Prerequisites:**

This is one of our advanced [workshops](https://hbctraining.github.io/main/training_spring2019.html#advanced-topics-analysis-of-high-throughput-sequencing-ngs-data), and **requires registants to have attended the following Basic workshop** offered by our training team in the **last 6-8 months**:
This is one of our advanced [workshops](https://hbctraining.github.io/main/), and **requires registants to have attended the following Basic workshop** offered by our training team in the **last 6-8 months**: (or have a working knowledg of Shell and HPC)

- [Introduction to command-line interface workshop ](https://hbctraining.github.io/main/registrations/AllFunders_Intro_to_Shell)
- [Shell for Bioinformatics](https://hbctraining.github.io/main/registrations/AllFunders_Intro_to_Shell) (formerly called Introduction to command-line interface workshop)

There is an expectation of participants to be comfortable with some/all of the following:
There is an expectation of participants to be confortable with some/all of the following:

* Navigating filesystems (changing directories, listing contents, full/relative paths, wildcards)
* Creating, moving, copying, and removing files/directories
* Searching files and redirection
* Creating "for loops" and/or short scripts
* Creating long, advanced scripts and submitting jobs
- Experience using a High-Performance Computing (HPC) cluster environment (e.g. O2 at HMS)
- Navigating filesystems (changing directories, listing contents, full/relative paths, wildcards)
- Creating, moving, copying, and removing files/directories
- Searching files and redirection
- Creating ‘for loops' and small scripts
- Creating long, advanced script

I am experienced using Shell/HPC but have not attended the HBC prerequisite workshop, can I still register?

Yes, please register and provide your Shell/HPC exerience on the form, and we'll get back to you.

<!-- This content will not appear in the rendered Markdown -->
<!-- PREVIOUS VERSION:
**I am fluent in command-line and already use HMS-RC's O2 cluster but have not attended the HBC prerequisite workshop, can I still register?**
Yes, you can register **AND** please do the following:
- Complete the registration first
- Then email us directly at [email protected] with a **detailed** description of your experience/usage of thw command-line interface and HPC.
- Then email us directly at [email protected] with a **detailed** description of your experience/usage of thw command-line interface and HPC. -->
---

### **Who should attend?**
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