-
Notifications
You must be signed in to change notification settings - Fork 17
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Update AllFunders_Understanding_chromatin_biology_usingHTS.md
- Loading branch information
1 parent
dd0e117
commit 9de2b59
Showing
1 changed file
with
23 additions
and
15 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,15 +1,16 @@ | ||
# Understanding chromatin biology using high-throughput sequencing workshop (2024) | ||
# Understanding chromatin biology using high-throughput sequencing workshop | ||
|
||
*Note: In 2024, some workshops will be taught in person and others will be online via Zoom.* | ||
*Note: Some HBC workshops are taught in person and others online via Zoom.* | ||
|
||
|
||
### **IN-PERSON Workshop dates and times (Longwood Medical Area):** | ||
<!-- ### **IN-PERSON Workshop dates and times (Longwood Medical Area):** --> | ||
### **ONLINE Workshop dates and times:** | ||
|
||
**Tuesday, September 17, 2024:** 9:30AM-12PM | ||
**Friday, May 2, 2025:** 9:30AM-12PM | ||
|
||
**Friday, September 20, 2024:** 9:30AM-12PM | ||
**Tuesday, May 6, 2025:** 9:30AM-12PM | ||
|
||
**Tuesday, September 24, 2024:** 9:30AM-12PM | ||
**Friday, May 9, 2025:** 9:30AM-12PM | ||
|
||
|
||
_Instruction will be mostly learner-centric, requiring a time commitment between the workshop sessions!_ | ||
|
@@ -34,24 +35,31 @@ This 3-day hands-on workshop will begin with a basic introduction of concepts re | |
|
||
### **Prerequisites:** | ||
|
||
This is one of our advanced [workshops](https://hbctraining.github.io/main/training_spring2019.html#advanced-topics-analysis-of-high-throughput-sequencing-ngs-data), and **requires registants to have attended the following Basic workshop** offered by our training team in the **last 6-8 months**: | ||
This is one of our advanced [workshops](https://hbctraining.github.io/main/), and **requires registants to have attended the following Basic workshop** offered by our training team in the **last 6-8 months**: (or have a working knowledg of Shell and HPC) | ||
|
||
- [Introduction to command-line interface workshop ](https://hbctraining.github.io/main/registrations/AllFunders_Intro_to_Shell) | ||
- [Shell for Bioinformatics](https://hbctraining.github.io/main/registrations/AllFunders_Intro_to_Shell) (formerly called Introduction to command-line interface workshop) | ||
|
||
There is an expectation of participants to be comfortable with some/all of the following: | ||
There is an expectation of participants to be confortable with some/all of the following: | ||
|
||
* Navigating filesystems (changing directories, listing contents, full/relative paths, wildcards) | ||
* Creating, moving, copying, and removing files/directories | ||
* Searching files and redirection | ||
* Creating "for loops" and/or short scripts | ||
* Creating long, advanced scripts and submitting jobs | ||
- Experience using a High-Performance Computing (HPC) cluster environment (e.g. O2 at HMS) | ||
- Navigating filesystems (changing directories, listing contents, full/relative paths, wildcards) | ||
- Creating, moving, copying, and removing files/directories | ||
- Searching files and redirection | ||
- Creating ‘for loops' and small scripts | ||
- Creating long, advanced script | ||
|
||
I am experienced using Shell/HPC but have not attended the HBC prerequisite workshop, can I still register? | ||
|
||
Yes, please register and provide your Shell/HPC exerience on the form, and we'll get back to you. | ||
|
||
<!-- This content will not appear in the rendered Markdown --> | ||
<!-- PREVIOUS VERSION: | ||
**I am fluent in command-line and already use HMS-RC's O2 cluster but have not attended the HBC prerequisite workshop, can I still register?** | ||
Yes, you can register **AND** please do the following: | ||
- Complete the registration first | ||
- Then email us directly at [email protected] with a **detailed** description of your experience/usage of thw command-line interface and HPC. | ||
- Then email us directly at [email protected] with a **detailed** description of your experience/usage of thw command-line interface and HPC. --> | ||
--- | ||
|
||
### **Who should attend?** | ||
|