add logs for concat gvcf and normalise #85
Workflow file for this run
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| name: CI | |
| on: | |
| pull_request: | |
| paths-ignore: | |
| - "docs/**" | |
| - "**.md" | |
| branches: | |
| - main | |
| jobs: | |
| Testing: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Test whole workflow | |
| uses: snakemake/[email protected] | |
| with: | |
| directory: .test/ci/ | |
| snakefile: workflow/Snakefile | |
| args: "--use-conda --show-failed-logs -j 1 --conda-cleanup-pkgs cache --conda-frontend mamba" | |
| stagein: "conda config --set channel_priority strict" |