Merge branch 'master' into docs/codespaces

gymrek-lab · Aug 26, 2024 · 00d04dc · 00d04dc
2 parents 3b460ac + dfec9c2
commit 00d04dc
Show file tree

Hide file tree

Showing 3 changed files with 6 additions and 5 deletions.
diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml
@@ -22,6 +22,7 @@ jobs:
           - { python: "3.12", os: "ubuntu-latest", session: "tests" }
           # - { python: "3.11", os: "windows-latest", session: "tests" }
           - { python: "3.8", os: "macos-13", session: "tests" }
+          - { python: "3.9", os: "macos-latest", session: "tests" }
           - { python: "3.8", os: "ubuntu-latest", session: "size" }
           - { python: "3.8", os: "ubuntu-latest", session: "coverage" }
 

diff --git a/dev-env.yml b/dev-env.yml
@@ -4,12 +4,12 @@ channels:
   - nodefaults
 dependencies:
   - conda-forge::python=3.8 # the lowest version of python that we formally support
-  - conda-forge::pip==23.3.2
-  - bioconda::bcftools==1.19
+  - conda-forge::pip==24.0
+  - bioconda::bcftools==1.20
   - bioconda::art==2016.06.05
   - conda-forge::poetry==1.8.3 # keep in sync with release.yml
-  - conda-forge::nox==2023.04.22
-  - conda-forge::poetry-plugin-export==1.6.0
+  - conda-forge::nox==2024.4.15
+  - conda-forge::poetry-plugin-export==1.8.0
   - pip:
     - nox-poetry==1.0.3
     - poetry-conda==0.1.1
diff --git a/noxfile.py b/noxfile.py
@@ -47,7 +47,7 @@ def tests(session: Session) -> None:
         """Run the test suite."""
         session.conda_install(
             "art",
-            "bcftools==1.19",
+            "bcftools",
             channel="bioconda",
         )
         session.conda_install(