fix: warn about and ignore duplicate entries in SBOMs #1289
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While from what I understand duplicates should not be possible in a valid SBOM, apparently they happen and it's useful for us to report + skip them.
Since doing this efficiently requires use of a map we in turn have to sort the packages to ensure a consistent output order, leading to me discovering that we're not already sorting the packages - I've opened #1288 to land that change first.
Resolves #330