Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Corrected relative gunzip paths in download scripts #459

Open
wants to merge 2 commits into
base: main
Choose a base branch
from

Conversation

Jondeen
Copy link

@Jondeen Jondeen commented May 6, 2022

The path used for gunzipping several files in scripts/download_*.sh had a double reference to ROOT_DIR (i.e. $ROOT_DIR/$ROOT_DIR/$BASENAME), making gunzip unable to locate the gzip file.

The path used for gunzipping `small_bfd` in `scripts/download_small_bfd.sh` had a double reference to ROOT_DIR (i.e. `$ROOT_DIR/$ROOT_DIR/$BASENAME`), making gunzip unable to locate the gzip file.
The path used for gunzipping `mgnify`, `uniprot`, and `uniref` in `scripts/download_*.sh` had a double reference to ROOT_DIR (i.e. `$ROOT_DIR/$ROOT_DIR/$BASENAME`), making gunzip unable to locate the gzip file.
@Jondeen Jondeen changed the title Corrected relative gunzip small_bfd path Corrected relative gunzip paths in download scripts May 6, 2022
@cmeesters
Copy link

also see #446

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants