A processing suite to analyze depth-dependent strains by fractional area and statistical testing. Originally made to use MRI-based strain maps. Only works with strains already calculated.
- Save your n x m size strain maps & masks using MATLAB .mat files in the following format:
- Strains: variable "strain" = x x
- Principal Strains: "strainP" = x x
- binary mask: "msk" = x x
- Open DepthFraction_MS.m
- Alter the %% SCRIPT PARAMTERS section to your needs
- Alter the %% LOAD STRAINS main loop to load your strain maps (currently all strain maps must be the exact same size)
- Alter the %% STATISTICAL TESTS section to your needs
- Run DepthFraction_MS.m