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Mesh volume conservation #1794

Merged
merged 73 commits into from
Oct 21, 2024
Merged

Mesh volume conservation #1794

merged 73 commits into from
Oct 21, 2024

Commits on Jan 26, 2022

  1. first files for volume constraint

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 26, 2022
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  2. add gpu_pos_list to mesh gpu list generator

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 26, 2022
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  3. fix volume factor

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 26, 2022
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Commits on Jan 27, 2022

  1. setup GPU code for MeshVolumeConstraint

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 27, 2022
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  2. rename VolumeConstraint class and link CPU code to hoomd

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 27, 2022
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  3. writing API

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 27, 2022
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  4. add test for volume

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 27, 2022
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Commits on Jan 28, 2022

  1. update VolumeConstraintGPU code and write partial sum code

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 28, 2022
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  2. link Volume constraint to hoomd

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 28, 2022
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  3. compiling GPU code (VolumeConstraint)

    SchoeniPhlippsn committed Jan 28, 2022
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  4. working GPU version (VolumeConstraint)

    SchoeniPhlippsn committed Jan 28, 2022
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Commits on Jan 30, 2022

  1. add get Volume

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 30, 2022
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Commits on Apr 19, 2022

  1. Merge branch 'mesh-data-structure' into mesh_volume_conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Apr 19, 2022
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Commits on May 12, 2022

  1. Merge branch 'trunk-minor' into mesh_volume_conservation

    SchoeniPhlippsn committed May 12, 2022
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Commits on Dec 31, 2022

  1. Merge branch 'mesh_rewrite' into mesh_volume_conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Dec 31, 2022
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  2. update VolumeCompute

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Dec 31, 2022
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  3. Merge branch 'mesh_rewrite' into mesh_volume_conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Dec 31, 2022
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  4. Merge branch 'mesh_rewrite' into mesh_volume_conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Dec 31, 2022
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  5. fix Autotuner

    SchoeniPhlippsn committed Dec 31, 2022
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  6. add equation to Docs

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Dec 31, 2022
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  7. create sphinx files for doc

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Dec 31, 2022
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Commits on Jan 9, 2023

  1. allow multi mesh types

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 9, 2023
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Commits on Jan 10, 2023

  1. fix Volume GPU code

    SchoeniPhlippsn committed Jan 10, 2023
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  2. minor improvements

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 10, 2023
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Commits on Jan 12, 2023

  1. Merge branch 'mesh_rewrite' into mesh_volume_conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Jan 12, 2023
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  2. update GPU Volume code

    SchoeniPhlippsn committed Jan 12, 2023
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Commits on Feb 2, 2023

  1. Merge branch 'mesh_rewrite' into mesh_volume_conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Feb 2, 2023
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  2. remove old file

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Feb 2, 2023
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  3. remove another old file

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Feb 2, 2023
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  4. another removed file

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Feb 2, 2023
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  5. another removed file

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Feb 2, 2023
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  6. fix pytest

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Feb 2, 2023
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  7. improve Volume calculations

    SchoeniPhlippsn committed Feb 2, 2023
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  8. remove old file

    SchoeniPhlippsn committed Feb 2, 2023
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Commits on Feb 21, 2023

  1. Merge branch 'mesh_rewrite' into mesh_volume_conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Feb 21, 2023
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Commits on Feb 28, 2023

  1. make VolumeConstraint MPI ready

    SchoeniPhlippsn committed Feb 28, 2023
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  2. Merge branch 'mesh_volume_conservation' of https://github.com/glotzer… 

    …lab/hoomd-blue into mesh_volume_conservation
    SchoeniPhlippsn committed Feb 28, 2023
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Commits on Mar 2, 2023

  1. fix GlobalN in volume conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Mar 2, 2023
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  2. Merge branch 'mesh_rewrite' into mesh_volume_conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Mar 2, 2023
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Commits on Mar 9, 2023

  1. Merge branch 'trunk-major' into mesh_volume_conservation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Mar 9, 2023
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Commits on Mar 17, 2023

  1. free memory in Volume calculation

    Philipp Schönhöfer authored and Philipp Schönhöfer committed Mar 17, 2023
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Commits on Mar 21, 2023

  1. fix Cuda issue for large systems

    SchoeniPhlippsn committed Mar 21, 2023
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Commits on Apr 7, 2023

  1. Merge branch 'trunk-major' into mesh_volume_conservation

    SchoeniPhlippsn committed Apr 7, 2023
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Commits on Jul 19, 2023

  1. Merge branch 'trunk-minor' into mesh_volume_conservation

    SchoeniPhlippsn committed Jul 19, 2023
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  2. change "alpha"to "default_gamma" in pytests

    SchoeniPhlippsn committed Jul 19, 2023
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Commits on Sep 27, 2023

  1. Merge branch 'trunk-patch' into mesh_volume_conservation

    SchoeniPhlippsn committed Sep 27, 2023
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Commits on Sep 28, 2023

  1. fix energy calculation and add ignore_type feature

    SchoeniPhlippsn committed Sep 28, 2023
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Commits on Sep 29, 2023

  1. fix energy when ignore_type

    SchoeniPhlippsn committed Sep 29, 2023
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Commits on Oct 6, 2023

  1. Merge branch 'trunk-patch' into mesh_volume_conservation

    SchoeniPhlippsn committed Oct 6, 2023
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Commits on Jan 15, 2024

  1. Merge branch 'trunk-patch' into mesh_volume_conservation

    SchoeniPhlippsn committed Jan 15, 2024
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Commits on Mar 25, 2024

  1. Merge branch 'trunk-patch' into mesh_volume_conservation

    SchoeniPhlippsn committed Mar 25, 2024
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Commits on May 31, 2024

  1. Merge branch 'trunk-patch' into mesh_volume_conservation

    SchoeniPhlippsn committed May 31, 2024
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  2. add conservation class description

    SchoeniPhlippsn committed May 31, 2024
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Commits on Jun 1, 2024

  1. remove commented out code

    SchoeniPhlippsn committed Jun 1, 2024
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  2. Merge branch 'trunk-minor' into mesh_volume_conservation

    SchoeniPhlippsn committed Jun 1, 2024
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Commits on Jun 3, 2024

  1. Merge branch 'trunk-minor' into mesh_volume_conservation

    @joaander
    joaander committed Jun 3, 2024
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Commits on Oct 9, 2024

  1. Merge branch 'trunk-minor' into mesh_volume_conservation

    SchoeniPhlippsn committed Oct 9, 2024
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  2. fix docstrings

    SchoeniPhlippsn committed Oct 9, 2024
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  3. fix docs

    SchoeniPhlippsn committed Oct 9, 2024
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  4. remove flags

    SchoeniPhlippsn committed Oct 9, 2024
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  5. update params

    SchoeniPhlippsn committed Oct 9, 2024
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  6. remove comments

    SchoeniPhlippsn committed Oct 9, 2024
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  7. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Oct 9, 2024
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  8. fix docstrings

    SchoeniPhlippsn committed Oct 9, 2024
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Commits on Oct 16, 2024

  1. Merge branch 'trunk-minor' into mesh_volume_conservation

    SchoeniPhlippsn committed Oct 16, 2024
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  2. add documentation for ignore_type

    SchoeniPhlippsn committed Oct 16, 2024
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  3. combine m_volume and m_volume_GPU

    SchoeniPhlippsn committed Oct 16, 2024
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  4. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Oct 16, 2024
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  5. rephrase docs

    SchoeniPhlippsn committed Oct 16, 2024
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  6. [pre-commit.ci] auto fixes from pre-commit.com hooks 

    for more information, see https://pre-commit.ci
    @pre-commit-ci
    pre-commit-ci[bot] committed Oct 16, 2024
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  7. fix typo

    SchoeniPhlippsn committed Oct 16, 2024
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  8. Merge branch 'mesh_volume_conservation' of https://github.com/glotzer… 

    …lab/hoomd-blue into mesh_volume_conservation
    SchoeniPhlippsn committed Oct 16, 2024
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  9. final rephrasing

    SchoeniPhlippsn committed Oct 16, 2024
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