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1. barricklab/burden barricklab/burden Public

   Burden monitor related scripts

   R 2

2. MGPipe MGPipe Public

   Shotgun metagenomics pipeline to process raw Illumina paired-end reads into usable microbiome data, suitable for Phyloseq postprocessing.

   Shell

3. genome-assembly genome-assembly Public

   Pipeline to assemble and annotate genomes; algorithms to align sequences.

   Python

4. sc-seq sc-seq Public

   Explore sc-RNA and ATAC sequencing data using machine learning methods.

   Jupyter Notebook

5. miRilizer miRilizer Public

   Web-hosted application to visualize the mRNA-miRNA interactome

   R

6. ADetectoLocum ADetectoLocum Public

   ADetectoLocum: Harnessing Locally Deployable LLMs for Early Alzheimer's Disease Detection Through Voice Analysis

   Jupyter Notebook