move scripts to python3

The python executable (i.e., Python version 2) is no longer available on modern versions of Ubuntu and other distributions.
geodynamics · Sep 15, 2022 · 9ac9baa · 9ac9baa
1 parent 2d46487
commit 9ac9baa
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Showing 5 changed files with 8 additions and 8 deletions.
diff --git a/post_processing/convert_full3d_to_nc.py b/post_processing/convert_full3d_to_nc.py
@@ -1,4 +1,4 @@
-#!/usr/bin/env python
+#!/usr/bin/env python3
 
 #
 #  Copyright (C) 2019 by the authors of the RAYLEIGH code.

diff --git a/post_processing/convert_full3d_to_vtu.py b/post_processing/convert_full3d_to_vtu.py
@@ -1,4 +1,4 @@
-#!/usr/bin/env python
+#!/usr/bin/env python3
 
 #
 #  Copyright (C) 2018 by the authors of the RAYLEIGH code.

diff --git a/pre_processing/rayleigh_spectral_input.py b/pre_processing/rayleigh_spectral_input.py
@@ -1,4 +1,4 @@
-#!/usr/bin/env python
+#!/usr/bin/env python3
 
 #
 #  Copyright (C) 2018 by the authors of the RAYLEIGH code.

diff --git a/tests/generic_input/run_test.sh b/tests/generic_input/run_test.sh
@@ -16,7 +16,7 @@ cd script
 ../../../pre_processing/rayleigh_spectral_input.py -ar 0.35 -sd 1.0 -nt 64 -nr 48 -o bench_t_init \
    -e 'import numpy as np; x = 2*radius - rmin - rmax; rmax*rmin/radius - rmin + 210*0.1*(1 - 3*x*x + 3*(x**4) - x**6)*(np.sin(theta)**4)*np.cos(4*phi)/np.sqrt(17920*np.pi)'
 # then we use a custom python script using rayleigh_spectral_input.py as a module to write the magnetic initial conditions
-PYTHONPATH=../../../pre_processing:$PYTHONPATH python generate_magnetic_input.py
+PYTHONPATH=../../../pre_processing:$PYTHONPATH python3 generate_magnetic_input.py
 # finally we run Rayleigh
 mpirun -np 4 $RAYLEIGH_TEST_MPI_PARAMS ../../../bin/rayleigh.dbg
 ../../../post_processing/convert_full3d_to_vtu.py
@@ -46,16 +46,16 @@ cd ..
 
 # then a case that generates a sparse radial generic input file
 cd radial_sparse
-PYTHONPATH=../../../pre_processing:$PYTHONPATH python generate_input.py
+PYTHONPATH=../../../pre_processing:$PYTHONPATH python3 generate_input.py
 mpirun -np 4 $RAYLEIGH_TEST_MPI_PARAMS ../../../bin/rayleigh.dbg
 cd ..
 
 # finally a version that generates a dense radial generic input file
 cd radial_dense
-PYTHONPATH=../../../pre_processing:$PYTHONPATH python generate_input.py
+PYTHONPATH=../../../pre_processing:$PYTHONPATH python3 generate_input.py
 mpirun -np 4 $RAYLEIGH_TEST_MPI_PARAMS ../../../bin/rayleigh.dbg
 cd ..
 
 # after both versions have run, we test the output for errors
-PYTHONPATH=../../post_processing:../../pre_processing:$PYTHONPATH python test_output.py
+PYTHONPATH=../../post_processing:../../pre_processing:$PYTHONPATH python3 test_output.py
 
diff --git a/tests/generic_input/test_output.py b/tests/generic_input/test_output.py
@@ -1,4 +1,4 @@
-#!/usr/bin/env python
+#!/usr/bin/env python3
 
 from rayleigh_diagnostics import Spherical_3D_multi, Shell_Slices
 from rayleigh_spectral_input import SpectralInput, radial_extents