Move shunit2 into ./contrib and add catch-1.8.7

genetics-statistics · Aug 20, 2017 · 2e76646 · 2e76646
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diff --git a/contrib/catch-1.9.7/catch.hpp b/contrib/catch-1.9.7/catch.hpp
diff --git a/test/shunit2-2.0.3/Makefile → contrib/shunit2-2.0.3/Makefile b/test/shunit2-2.0.3/Makefile → contrib/shunit2-2.0.3/Makefile
diff --git a/test/shunit2-2.0.3/bin/docbookPrep.sh → contrib/shunit2-2.0.3/bin/docbookPrep.sh b/test/shunit2-2.0.3/bin/docbookPrep.sh → contrib/shunit2-2.0.3/bin/docbookPrep.sh
diff --git a/test/shunit2-2.0.3/bin/extractDocs.pl → contrib/shunit2-2.0.3/bin/extractDocs.pl b/test/shunit2-2.0.3/bin/extractDocs.pl → contrib/shunit2-2.0.3/bin/extractDocs.pl
diff --git a/test/shunit2-2.0.3/bin/which → contrib/shunit2-2.0.3/bin/which b/test/shunit2-2.0.3/bin/which → contrib/shunit2-2.0.3/bin/which
diff --git a/test/shunit2-2.0.3/doc/CHANGES-2.0.txt → contrib/shunit2-2.0.3/doc/CHANGES-2.0.txt b/test/shunit2-2.0.3/doc/CHANGES-2.0.txt → contrib/shunit2-2.0.3/doc/CHANGES-2.0.txt
diff --git a/test/shunit2-2.0.3/doc/LGPL-2.1 → contrib/shunit2-2.0.3/doc/LGPL-2.1 b/test/shunit2-2.0.3/doc/LGPL-2.1 → contrib/shunit2-2.0.3/doc/LGPL-2.1
diff --git a/test/shunit2-2.0.3/doc/README.txt → contrib/shunit2-2.0.3/doc/README.txt b/test/shunit2-2.0.3/doc/README.txt → contrib/shunit2-2.0.3/doc/README.txt
diff --git a/...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.0.txt → ...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.0.txt b/...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.0.txt → ...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.0.txt
diff --git a/...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.1.txt → ...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.1.txt b/...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.1.txt → ...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.1.txt
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diff --git a/...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.3.txt → ...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.3.txt b/...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.3.txt → ...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.3.txt
diff --git a/...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.4.txt → ...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.4.txt b/...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.4.txt → ...shunit2-2.0.3/doc/RELEASE_NOTES-2.0.4.txt
diff --git a/test/shunit2-2.0.3/doc/TODO.txt → contrib/shunit2-2.0.3/doc/TODO.txt b/test/shunit2-2.0.3/doc/TODO.txt → contrib/shunit2-2.0.3/doc/TODO.txt
diff --git a/test/shunit2-2.0.3/doc/contributors.txt → contrib/shunit2-2.0.3/doc/contributors.txt b/test/shunit2-2.0.3/doc/contributors.txt → contrib/shunit2-2.0.3/doc/contributors.txt
diff --git a/test/shunit2-2.0.3/doc/design_doc.txt → contrib/shunit2-2.0.3/doc/design_doc.txt b/test/shunit2-2.0.3/doc/design_doc.txt → contrib/shunit2-2.0.3/doc/design_doc.txt
diff --git a/test/shunit2-2.0.3/doc/shunit2.html → contrib/shunit2-2.0.3/doc/shunit2.html b/test/shunit2-2.0.3/doc/shunit2.html → contrib/shunit2-2.0.3/doc/shunit2.html
diff --git a/test/shunit2-2.0.3/doc/style.css → contrib/shunit2-2.0.3/doc/style.css b/test/shunit2-2.0.3/doc/style.css → contrib/shunit2-2.0.3/doc/style.css
diff --git a/test/shunit2-2.0.3/lib/sh/shlib → contrib/shunit2-2.0.3/lib/sh/shlib b/test/shunit2-2.0.3/lib/sh/shlib → contrib/shunit2-2.0.3/lib/sh/shlib
diff --git a/...book/tldp-xsl/21MAR2004/fo/tldp-print.xsl → ...book/tldp-xsl/21MAR2004/fo/tldp-print.xsl b/...book/tldp-xsl/21MAR2004/fo/tldp-print.xsl → ...book/tldp-xsl/21MAR2004/fo/tldp-print.xsl
diff --git a/...k/tldp-xsl/21MAR2004/html/tldp-common.xsl → ...k/tldp-xsl/21MAR2004/html/tldp-common.xsl b/...k/tldp-xsl/21MAR2004/html/tldp-common.xsl → ...k/tldp-xsl/21MAR2004/html/tldp-common.xsl
diff --git a/...tldp-xsl/21MAR2004/html/tldp-one-page.xsl → ...tldp-xsl/21MAR2004/html/tldp-one-page.xsl b/...tldp-xsl/21MAR2004/html/tldp-one-page.xsl → ...tldp-xsl/21MAR2004/html/tldp-one-page.xsl
diff --git a/...unit2-2.0.3/share/resources/shelldoc.xslt → ...unit2-2.0.3/share/resources/shelldoc.xslt b/...unit2-2.0.3/share/resources/shelldoc.xslt → ...unit2-2.0.3/share/resources/shelldoc.xslt
diff --git a/test/shunit2-2.0.3/src/docbook/functions.xml → ...b/shunit2-2.0.3/src/docbook/functions.xml b/test/shunit2-2.0.3/src/docbook/functions.xml → ...b/shunit2-2.0.3/src/docbook/functions.xml
diff --git a/...hunit2-2.0.3/src/docbook/introduction.xml → ...hunit2-2.0.3/src/docbook/introduction.xml b/...hunit2-2.0.3/src/docbook/introduction.xml → ...hunit2-2.0.3/src/docbook/introduction.xml
diff --git a/.../shunit2-2.0.3/src/docbook/quickstart.xml → .../shunit2-2.0.3/src/docbook/quickstart.xml b/.../shunit2-2.0.3/src/docbook/quickstart.xml → .../shunit2-2.0.3/src/docbook/quickstart.xml
diff --git a/test/shunit2-2.0.3/src/docbook/shunit2.xml → ...rib/shunit2-2.0.3/src/docbook/shunit2.xml b/test/shunit2-2.0.3/src/docbook/shunit2.xml → ...rib/shunit2-2.0.3/src/docbook/shunit2.xml
diff --git a/test/shunit2-2.0.3/src/shell/shunit2 → contrib/shunit2-2.0.3/src/shell/shunit2 b/test/shunit2-2.0.3/src/shell/shunit2 → contrib/shunit2-2.0.3/src/shell/shunit2
diff --git a/test/shunit2-2.0.3/src/test/run-test-suite → ...rib/shunit2-2.0.3/src/test/run-test-suite b/test/shunit2-2.0.3/src/test/run-test-suite → ...rib/shunit2-2.0.3/src/test/run-test-suite
diff --git a/...shunit2-2.0.3/src/test/test-functions.inc → ...shunit2-2.0.3/src/test/test-functions.inc b/...shunit2-2.0.3/src/test/test-functions.inc → ...shunit2-2.0.3/src/test/test-functions.inc
diff --git a/test/shunit2-2.0.3/src/test/testAsserts → contrib/shunit2-2.0.3/src/test/testAsserts b/test/shunit2-2.0.3/src/test/testAsserts → contrib/shunit2-2.0.3/src/test/testAsserts
diff --git a/test/shunit2-2.0.3/src/test/testFailures → contrib/shunit2-2.0.3/src/test/testFailures b/test/shunit2-2.0.3/src/test/testFailures → contrib/shunit2-2.0.3/src/test/testFailures
diff --git a/test/shunit2-2.0.3/src/test/testInternalFx → ...rib/shunit2-2.0.3/src/test/testInternalFx b/test/shunit2-2.0.3/src/test/testInternalFx → ...rib/shunit2-2.0.3/src/test/testInternalFx
diff --git a/test/shunit2-2.0.3/src/test/testSuiteFx → contrib/shunit2-2.0.3/src/test/testSuiteFx b/test/shunit2-2.0.3/src/test/testSuiteFx → contrib/shunit2-2.0.3/src/test/testSuiteFx
diff --git a/test/data/issue26/mydata.bim b/test/data/issue26/mydata.bim
diff --git a/test/data/issue26/mydata.fam b/test/data/issue26/mydata.fam
diff --git a/test/data/issue26/mydata_kinship.sXX.txt b/test/data/issue26/mydata_kinship.sXX.txt